| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_0552 |
|---|
| Symbol | |
|---|
| ID | 6477456 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | + |
|---|
| Start bp | 655932 |
|---|
| End bp | 656795 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642729697 |
|---|
| Product | General secretion pathway protein K |
|---|
| Protein accession | YP_002026940 |
|---|
| Protein GI | 194364330 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3156] Type II secretory pathway, component PulK |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.0965369 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGGC AAGGTGGCGC CGCGCTGGTG CTGGTGTTGT GGTTGATCGC GTTGATGACT
GCGCTGGTCG GCGCCTTTGC ACTGAGCGCG CGGGTCGAGC ACCTGCAGCA GCGGGTGCTG
GATGACGACG CGCGCGGCCA GGAGCGTGCA CGGGCCGGCC TGGAATATGC GCTGATGCGC
CTGTCCGCCG ATCCGCAGCG GGCCCCGTGG CGGGCCGATG GCCGTACCTA TCGCTGGACG
TTCGATGACG CCAGCATCGA GATCAAGGTG CTGGACGAGA ACGGCAAGAT CAACCTGAAT
CTGGCCGATG TGGCCCTGCT GACCGCTTTC CTCAAGGCGC TGGGCGAAGA CGAAGGAGCC
GCACGGCAGC TGGCCGGTGC CATCGTCGAC TGGCGCGACG AGGACAGCCT GCTGCAGCCC
GGTGGCGGTG CCGAGGCACC CGACTATGCC GCGGCCGGGT TGCCGTATGG CCCGCGCAAC
AAGCGTTTCG AGACTCTGGG CGAACTGCAG CGGGTGCTTG GCATGCCCGG GCCGTTGTAC
CAGAAGATGC TGCCGCACCT GACCCTGTAC AGCCGCCAGG CACGCCCGGA TCCGCAGTTT
GCCAGTGCGC CGGTGCTGAC CGCATTGGGG CTGGATGCCG ACACCGTGCT GGCCCAGCGT
GCCCAGCAGG AGCGTGATGC CGATACCGCT GCGGGTGCGA CAACGCTTGC CAGCAGCAGT
GGCACCTATA GTATCGAGTC CCGTGTCATC GACGGCAGCG GACGCCGGTC GGTGCTGCAG
GCAGTGGTAC GCAACGGCTC GGGCGGGGTT CCCGGGCGGT CCTACACAGT GCTTCGCTGG
GAGCAGGGAA TGACAGCAAG ATGA
|
|---|
| Protein sequence | MNRQGGAALV LVLWLIALMT ALVGAFALSA RVEHLQQRVL DDDARGQERA RAGLEYALMR
LSADPQRAPW RADGRTYRWT FDDASIEIKV LDENGKINLN LADVALLTAF LKALGEDEGA
ARQLAGAIVD WRDEDSLLQP GGGAEAPDYA AAGLPYGPRN KRFETLGELQ RVLGMPGPLY
QKMLPHLTLY SRQARPDPQF ASAPVLTALG LDADTVLAQR AQQERDADTA AGATTLASSS
GTYSIESRVI DGSGRRSVLQ AVVRNGSGGV PGRSYTVLRW EQGMTAR
|
|---|
| |