Gene Smal_0503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0503 
Symbol 
ID6477407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp592506 
End bp593561 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content65% 
IMG OID642729648 
ProductdTDP-glucose 4,6-dehydratase 
Protein accessionYP_002026891 
Protein GI194364281 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1088] dTDP-D-glucose 4,6-dehydratase 
TIGRFAM ID[TIGR01181] dTDP-glucose 4,6-dehydratase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0802438 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0327306 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCACAT GGCTTGTCAC CGGCGGCGCC GGATTCATTG GCGGTAACTT CGTTCTTGAA 
GCCGTCGCGC GCGGCGTCAA GGTCATCAAC CTTGATGTGC TGACCTACGC CGGCAACCTG
AAGACCCTGT CCAGCCTTGA TGGCAACCCG AACCACCTGT TCGTCCAAGG CGACATCGGT
GACCGCGAAC TGGTCACCCG CCTGCTGGCC GAGCACCGGC CGGACGCGGT GCTCAACTTC
GCCGCCGAGA GCCACGTGGA TCGCTCCATC GACGTTCCGG GCGCCTTCAT CCAGACCAAC
GTGGTGGGTA CCCTGGGCCT GCTGGAAGCG GTCCGTGACT ACTGGAAGGC GCTGCCGGCC
GAGCAGGGTG CGGACTTCCG CTTCCTGCAC GTGTCCACCG ACGAGGTGTA CGGCACCCTG
GGCGAGACCG GCAAGTTCAG CGAAACCACG CCGTATGCCC CGAATTCGCC GTACTCGGCG
TCGAAGGCGG CTTCGGACCA CTTGGTCCGC GCCTTCCACC ACACCTACGG GCTGCCGGTG
CTGACCACCA ACTGCTCCAA CAATTACGGC CCGTACCACT TCCCCGAGAA GCTAATTCCG
CTGGTGATCG CCAAGGCGCT GGCTGGCGAG CCGCTGCCTG TCTACGGCGA TGGCAAGCAG
GTGCGCGACT GGCTGTTCGT GTCCGACCAC TGCGAAGCGA TCCGCACCGT GCTGGCCAAG
GGCCAGGTCG GCGAGACCTA CAACGTCGGC GGCAACTCGG AAAAGCAGAA CATCGAAGTG
GTGCAGGCGA TCTGTGCGCT GCTCGATGCG CGCCGCCCGC GTGAGGATGG CCAGCCGCGC
AGCAGCCAGA TCACCTACGT GGCCGATCGC CCCGGCCACG ACCGCCGCTA CGCGATCGAT
GCGTCGAAGC TGAAGAACGA CCTGGGCTGG GAACCGGCCT ACACCTTCGA GCAGGGCATC
ACCTTCACCG TCGACTGGTA CCTCGACAAC CAGGAATGGG TCAACGGCGT GCTCGACGGC
AGCTACCGTC TGCAGCGCAT CGGCACCGCG GGCTGA
 
Protein sequence
MPTWLVTGGA GFIGGNFVLE AVARGVKVIN LDVLTYAGNL KTLSSLDGNP NHLFVQGDIG 
DRELVTRLLA EHRPDAVLNF AAESHVDRSI DVPGAFIQTN VVGTLGLLEA VRDYWKALPA
EQGADFRFLH VSTDEVYGTL GETGKFSETT PYAPNSPYSA SKAASDHLVR AFHHTYGLPV
LTTNCSNNYG PYHFPEKLIP LVIAKALAGE PLPVYGDGKQ VRDWLFVSDH CEAIRTVLAK
GQVGETYNVG GNSEKQNIEV VQAICALLDA RRPREDGQPR SSQITYVADR PGHDRRYAID
ASKLKNDLGW EPAYTFEQGI TFTVDWYLDN QEWVNGVLDG SYRLQRIGTA G