Gene Smal_0493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0493 
Symbol 
ID6477397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp578843 
End bp581014 
Gene Length2172 bp 
Protein Length723 aa 
Translation table11 
GC content61% 
IMG OID642729638 
Productglycosyl transferase family 2 
Protein accessionYP_002026881 
Protein GI194364271 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCTTGA GGGTTTTTGT TACCCGCGAA CTTTTCCCCT TTACCGCCGG TGGCATTGGA 
CGCGTGATCG CGAACATGCT GATGACCGCG CCGGAAGAAG AGCGCGCGGA GATGGCAGTA
CTTTACGTTG GCGACAACGT CGAAGCGGAT GCGTTCGCGG TCGCCCACCC GGTCGTGACC
TTCCTCGCGT GGCCGCATTC GCGCTTTCAA CAAGTAGACG AGCGTGGGGA GATTTTCCCG
CCAATGCCGG CGTTCACCCA CAGTATGCTG CACTGGGAAT CGGTGCATGT GCTGCAGGGG
CTGCTCGAGC TGGAACGTCT GAAAGGCCCG CTTGAGTATG TCGAGTTCGT GGACTGGGGG
GCACCTGCGT TCGCCGCAAC CCAGGAAAAG CTGCTTGGCA GCGCATTGAC GACGGCCACG
CTGGCCGTGC GCCTGCACAC CACAGACAGC ATTCTGGCCG ATTTTGAGCC GCGCGTGCAG
AGTGTGCACG GGTTGAATCT CTTTGACCTG GAACGAAAGG CACTGGCCGA TTGCGACCTT
ATCGTCGGTC AGATCGCGCC GGTTGCCGAG GCGTTCCGCG TGTTCTACGG TTTCAGCGAG
GAGGAGTGGA CTCCACGCCT GCGCCTGCAT GCTCCGCCGG TGTTGCTGGA TACGATGCAG
CCGGTCGCGC AGACCACCGT GATCGATGAT ACAACGTCGC TGTTGTTCAC TTCGAAACTG
CAGGACATCA AGCGCCCAGA TACTTTCATC CGTGGCTGCA TCCAGTTCCT GCGGGACAGG
CCGCGTTATC AGGGCAACAT TGTTTTCCTG GCGCATTCTT TTGATGTGAG CTATCAGGAG
TATGTCATCT CGCTGGTGCC GGAGGACCTG CGCAGCCGGG TGGTGTTTGC CCGTGGCGTA
ACCGGTGCGG CGCGCGAGAA GAGCATTTCT GGCGCGGTAT GCGTATTCCC GTCGCCATGG
GAGTCGTTCT GCCTTGCTGC GTACGAGGCG TCGCTGTCAG GCGCAGCCTG CGTGCTCAAT
GCGCAGAATC CGGCTTTCGG GCCGGGCAGT CCGTGGCGGG ATGGATGTAA CTGCAGCACG
TTTGATGGCA GCGCCGAAGA CCTGGCACGC GCGCTTTGCG GGCTTTTTGA AAGCACCGTC
GGCCGACTGT CGCCGGTCGA GGTGCCGAAG GACCCGCTTC CCTGGAAGGG GCTTGATCCG
GTGGCGGTGC CTGCTGCCGT TCCCCTGGAC AGGCAATTGA CCGTAGTCGT CGTCAATCGC
GATAGCGCGG GCCGGGTGTT GAATTCGCTG GACAGCATCC TCGCGTCCAA TCTGACGCTT
GACAAGCTGA TCGTGATTGA CGATGCCTCG CGCGACCCGC GCGATATCGC TGCGCTGGAC
CAGCTGGGCA ACAATGATCC ACGTTTGTCC GTGCACCGGC TTGCGGTGCC CGTTGGTGAC
GCTGTAGCGC GCAACATGGG CCTTGCGTTG GTTGAGACGC CGTTTGCTGG ATTCGTGCGT
GGTGGTGACC AGTTGCTGCC GGGCTTCCTC AATGGCGCGG TGAGCGCATT GGCGTCGCAA
CCGGATTTTG ATGTGGTCGT GGGGCAGGTG GGCGTGACCG TAGATCCCGA TGATGTGATC
GCCGGCAATG TCGCCCCGGA TGGATTCCGC ATTTTCTATG GTGAAGGACG CCTCGCAGGA
CTCTACGAGA ACCGCCTGGC GCCGGAAAGC TACGTGATCC GGACCGAGGT CGCCAGGCGC
TTCGCATTCG ATCCCGTCAT CCCTGCACTT GAAGTATGGG AAATGATGCT GCGCGCCTGC
CAGTCGGGTG CACGCTTCAT GGTGACTTCC GCCGTGAACG TGCTTGCACG GCATCAGGGG
CAACCAGATG AACGGCACTT GGAGCAGATC CAGATCGCGA TGCGCCGACG CCTGCAGCGC
AAGCGCGTGC GTGTCGGCTC ACTGGAGGTA CCTGCGTACT TCATCTTCGG TGCGCATGTA
TCGCCGAGCG GGTTCATGGG GGATGCCTCC AACGCGGAAA TGGCCTATCG GCTGCAGGCA
CTGATGGAAA GCGAGTCCGT GCGCTACACC CTGGCACTTG CCAGGCTTCT GCAGAAGCGG
GCGCCATGGG TACTGCGCTT GGGTAAATGG TCGGTGCAGA GACTGGCGCC GATCTATCGC
CGATTGCGGT GA
 
Protein sequence
MGLRVFVTRE LFPFTAGGIG RVIANMLMTA PEEERAEMAV LYVGDNVEAD AFAVAHPVVT 
FLAWPHSRFQ QVDERGEIFP PMPAFTHSML HWESVHVLQG LLELERLKGP LEYVEFVDWG
APAFAATQEK LLGSALTTAT LAVRLHTTDS ILADFEPRVQ SVHGLNLFDL ERKALADCDL
IVGQIAPVAE AFRVFYGFSE EEWTPRLRLH APPVLLDTMQ PVAQTTVIDD TTSLLFTSKL
QDIKRPDTFI RGCIQFLRDR PRYQGNIVFL AHSFDVSYQE YVISLVPEDL RSRVVFARGV
TGAAREKSIS GAVCVFPSPW ESFCLAAYEA SLSGAACVLN AQNPAFGPGS PWRDGCNCST
FDGSAEDLAR ALCGLFESTV GRLSPVEVPK DPLPWKGLDP VAVPAAVPLD RQLTVVVVNR
DSAGRVLNSL DSILASNLTL DKLIVIDDAS RDPRDIAALD QLGNNDPRLS VHRLAVPVGD
AVARNMGLAL VETPFAGFVR GGDQLLPGFL NGAVSALASQ PDFDVVVGQV GVTVDPDDVI
AGNVAPDGFR IFYGEGRLAG LYENRLAPES YVIRTEVARR FAFDPVIPAL EVWEMMLRAC
QSGARFMVTS AVNVLARHQG QPDERHLEQI QIAMRRRLQR KRVRVGSLEV PAYFIFGAHV
SPSGFMGDAS NAEMAYRLQA LMESESVRYT LALARLLQKR APWVLRLGKW SVQRLAPIYR
RLR