Gene Smal_0340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0340 
Symbol 
ID6478210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp405539 
End bp406978 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content68% 
IMG OID642729485 
ProductNLP/P60 protein 
Protein accessionYP_002026728 
Protein GI194364118 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCTGG CTTCCCGCGA ACCGCGCCGG CACTGGCCGC GCCGGTTGAC CCTGGCCCTG 
TGCCTGCTGG CCGCACCGGC CTTTGCACAG GCCACCCCGG CGCCCGATCC CGGCGCACCG
CTGCCGTATG TGATCGGCCT GCACGAGGCC TACCTCACGC CGGGCTACTG GGCAGCACGG
CTCGAAAACG CCGACACCCC GATCCTCGAC CGCATGCAGA TCGACGCGCA GAACGCACGC
ATGCGGGCGC AGGACAGACA CATCCAGGAC ATCGCCGTGC TGCCCGCACA GCTTGATGCA
GCGGCAGTGC GCGGCAGCAT CACCGCACTG TCGAGCTGGC CCACCCGCAC GCTGTACAAC
GACGAGGGCC AGGCCATCAC CCCGGCACTG CGCAGCGCGA TCGAAGCCAA TCTCGGTCTT
GATGCCATTC CCGCGCAGAC GACACCGCAA TACGGGCTGG TGGTGAAGCG CGCCGCACTG
CGCACCTTCC CCACCCGCGA GCGCGTCTTC AGCACCGTCG GCGACACCGA CATCGACCGC
TTCCAGGAAT CGGCTCTGTT CCCCGGCGAC AAGGTCGCCG TGGTCCATCG CAGCGCCGAT
GGCCGCTGGC TGTTCGTGCA CAGCGAACGC TACAGCGCGT GGATCGAGGC CGACGCCATC
GCCAGCGGCG ACAAGGCCAC GGTGCTCGGC TACGGCGCGA AGGGGCCGTA CCGCATCGTC
ACCGGCGCCA CCGCACAGAC CGCCTACACA CCGGAAGAAC CACGCGTCTC GCGCCTGCAG
CTGGACATGG GCGTGCGCCT GCCGGTGCTG GCTGACTGGC CGGCCGCCGA ACCGGTGAAC
GGCCAGCAGG CGCACGCCGC GTGGGTGGTG CAGCTGCCGG TACGCGAAAG CGATGGCCGG
TTGAAGTTGG TACCGGCGCT GCTGCCGCGT TCGCAGGACA CCGCCGCCGA CTACCTACCG
CTGACTCCAC GCCTGCTGCT GCAGCAGGCC TTCAAATTCC TCGGTGAACG CTACGGCTGG
GGCCACGACT ACGACACCCG CGACTGCAGC GGTTTCGTTT CCGAGATCTA CCGCAGCTTC
GGCGTGCTCC TACCGCGCAA TACCAGCGCG CAGGCGGTCA GTCCGGCGCT GGACCGCGTG
CCGTTCACCG GCAAGGACGG CAAGGCCGTG CGCGACAGCG CCGTCACCGA TCTGCAGGTG
GGCGATCTGG TCTACATCCC CGGCCACGTG ATGATGGCCA TCGGCCATGT CGACGGCCGC
ACCTGGGTCA TCCACGATAC GGCGGGCGGC AGCTGGTACG GTGCAGACGG CAAACGCGTG
CAGGCCCATC TCAATGGTGT TTCGGTCACC CCGCTGGAGC CGATGATGGC CAGCGACAGC
GTCCGCTACA TCGATCGCAT CACCAACATC CAACGCCTGC GTGCCAAGAC TCCTGAATGA
 
Protein sequence
MILASREPRR HWPRRLTLAL CLLAAPAFAQ ATPAPDPGAP LPYVIGLHEA YLTPGYWAAR 
LENADTPILD RMQIDAQNAR MRAQDRHIQD IAVLPAQLDA AAVRGSITAL SSWPTRTLYN
DEGQAITPAL RSAIEANLGL DAIPAQTTPQ YGLVVKRAAL RTFPTRERVF STVGDTDIDR
FQESALFPGD KVAVVHRSAD GRWLFVHSER YSAWIEADAI ASGDKATVLG YGAKGPYRIV
TGATAQTAYT PEEPRVSRLQ LDMGVRLPVL ADWPAAEPVN GQQAHAAWVV QLPVRESDGR
LKLVPALLPR SQDTAADYLP LTPRLLLQQA FKFLGERYGW GHDYDTRDCS GFVSEIYRSF
GVLLPRNTSA QAVSPALDRV PFTGKDGKAV RDSAVTDLQV GDLVYIPGHV MMAIGHVDGR
TWVIHDTAGG SWYGADGKRV QAHLNGVSVT PLEPMMASDS VRYIDRITNI QRLRAKTPE