Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_0186 |
Symbol | |
ID | 6477817 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 227092 |
End bp | 228000 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642729319 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_002026574 |
Protein GI | 194363964 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.925738 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.858916 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCATCG AACTGCGCCA CCTGCGCTAC TTCCTCGCCG TTGCCGATAC CCTGCACTTC GGACAGGCGG CGGAGCGGTT GGGCATGTCG CAGCCGCCGC TCAGCCAGCA GATCCGCCAG CTGGAAGATC TGATCGGTGC GCGGCTGTTC GTGCGCAGTC ATCGCCGTGT GCAGCTCACT GCCGCAGGTG AGCTGCTGCA GGAACGTGCA CGCGCCATCG TGCTGCAGGT CGAGTCTGCG GTGGACGAAG TGCAGCGTGC GCAGCGCGGC GAGCAGGGTG AGCTGCGCAT CGGGTTGACC CGCGCCACGC CACTGTCACC GCAGATTCCG CGTTCAATCC TGCAGTACCG CCAGCGTTAT CCGCAGGTGC GGCTGCAGCT GAGCGAGATG AACACCCTGC AGCAGATCGA TGCGCTGCTC GATGGCAGCC TGGACGTGGG CATCATCCGC AAGCGCGCGT TGCCGCCGGA ACTGGTGGCG CACAGCCTGT TCGTCGATCC GCTGGCGTTG ATCGTGCATG CCGATCACCC TGCCCTGCGC AGACTGTCGA AACAGGGCAC GCTGTCGCTG CGCGACTTCG CCCAGGAGCC GTTCGTGGCA TTCCGCCGCA GTGCCGGTGC GGGCATCCAT GACCACATGA TCGCGTTGTG TGCGGCGGCG GGCTTCACCC CGCGCATCGT GCAGGAGGCC GGTGAGGCGT CGACGCTGAT CAGTCTGGCC GCCGCAGGCC TGGGCGCAGC GATCCTGCCG TCGTCGTGCG ACCACATCCG CGTGGAAGGC GCGCGCTTCG TGGCACTGGC CGATGCCGGT GCGCATTCGG AAGTGCAGCT GGCATGGCAC CGCGAAGGGG TGACACCGCT GATCCGCAAT TTTGCTGGGC TGCTGCGCGA GGCGTTCGCG GAGGGGTGA
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Protein sequence | MSIELRHLRY FLAVADTLHF GQAAERLGMS QPPLSQQIRQ LEDLIGARLF VRSHRRVQLT AAGELLQERA RAIVLQVESA VDEVQRAQRG EQGELRIGLT RATPLSPQIP RSILQYRQRY PQVRLQLSEM NTLQQIDALL DGSLDVGIIR KRALPPELVA HSLFVDPLAL IVHADHPALR RLSKQGTLSL RDFAQEPFVA FRRSAGAGIH DHMIALCAAA GFTPRIVQEA GEASTLISLA AAGLGAAILP SSCDHIRVEG ARFVALADAG AHSEVQLAWH REGVTPLIRN FAGLLREAFA EG
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