Gene Smal_0186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0186 
Symbol 
ID6477817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp227092 
End bp228000 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content67% 
IMG OID642729319 
Producttranscriptional regulator, LysR family 
Protein accessionYP_002026574 
Protein GI194363964 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.925738 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.858916 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATCG AACTGCGCCA CCTGCGCTAC TTCCTCGCCG TTGCCGATAC CCTGCACTTC 
GGACAGGCGG CGGAGCGGTT GGGCATGTCG CAGCCGCCGC TCAGCCAGCA GATCCGCCAG
CTGGAAGATC TGATCGGTGC GCGGCTGTTC GTGCGCAGTC ATCGCCGTGT GCAGCTCACT
GCCGCAGGTG AGCTGCTGCA GGAACGTGCA CGCGCCATCG TGCTGCAGGT CGAGTCTGCG
GTGGACGAAG TGCAGCGTGC GCAGCGCGGC GAGCAGGGTG AGCTGCGCAT CGGGTTGACC
CGCGCCACGC CACTGTCACC GCAGATTCCG CGTTCAATCC TGCAGTACCG CCAGCGTTAT
CCGCAGGTGC GGCTGCAGCT GAGCGAGATG AACACCCTGC AGCAGATCGA TGCGCTGCTC
GATGGCAGCC TGGACGTGGG CATCATCCGC AAGCGCGCGT TGCCGCCGGA ACTGGTGGCG
CACAGCCTGT TCGTCGATCC GCTGGCGTTG ATCGTGCATG CCGATCACCC TGCCCTGCGC
AGACTGTCGA AACAGGGCAC GCTGTCGCTG CGCGACTTCG CCCAGGAGCC GTTCGTGGCA
TTCCGCCGCA GTGCCGGTGC GGGCATCCAT GACCACATGA TCGCGTTGTG TGCGGCGGCG
GGCTTCACCC CGCGCATCGT GCAGGAGGCC GGTGAGGCGT CGACGCTGAT CAGTCTGGCC
GCCGCAGGCC TGGGCGCAGC GATCCTGCCG TCGTCGTGCG ACCACATCCG CGTGGAAGGC
GCGCGCTTCG TGGCACTGGC CGATGCCGGT GCGCATTCGG AAGTGCAGCT GGCATGGCAC
CGCGAAGGGG TGACACCGCT GATCCGCAAT TTTGCTGGGC TGCTGCGCGA GGCGTTCGCG
GAGGGGTGA
 
Protein sequence
MSIELRHLRY FLAVADTLHF GQAAERLGMS QPPLSQQIRQ LEDLIGARLF VRSHRRVQLT 
AAGELLQERA RAIVLQVESA VDEVQRAQRG EQGELRIGLT RATPLSPQIP RSILQYRQRY
PQVRLQLSEM NTLQQIDALL DGSLDVGIIR KRALPPELVA HSLFVDPLAL IVHADHPALR
RLSKQGTLSL RDFAQEPFVA FRRSAGAGIH DHMIALCAAA GFTPRIVQEA GEASTLISLA
AAGLGAAILP SSCDHIRVEG ARFVALADAG AHSEVQLAWH REGVTPLIRN FAGLLREAFA
EG