| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_0122 |
|---|
| Symbol | |
|---|
| ID | 6477671 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | + |
|---|
| Start bp | 162245 |
|---|
| End bp | 163306 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 642729255 |
|---|
| Product | signal transduction histidine kinase, nitrogen specific, NtrB |
|---|
| Protein accession | YP_002026510 |
|---|
| Protein GI | 194363900 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.545461 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.163107 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGACC CCGCACCGCC GCCATCCCTC GACGCCCTGG GCACGCCGCT GGCCTGGGCC
GGGGCTGATG GCCGCATCAT CGGCTGCAAC CCGGCCTTCG CGCGTTGGCT GGGTGTCAGC
ATCCGCCGCC TGCTTGGCCA GCCGCTGGCC GCGCTGGAAG TGCAGGGCGA GGCGCTGGCC
CATTTCCTGG CCCGCGATGA GCGCGACAGT CTGCGCCTGA ACCGGCTGGC CCTGGCGGTG
CCGGGCGAGG CACCACGCTT CGCCGAGGGC TGGATGAGCC GCCGCGACGA TGGTGGCTGG
TTGCTGGAGG CGCACCCGGT CGATGAGTTC CCCGGGCTCG ACCCGACCCA GGCCCTGCCC
AGCGCGCTCA GTGCAGCGCT GAAGGGGCTG GCCCATGAGC TGCGCAATCC GCTGGCCGGG
CTGAAGGGCG CGGCCCAGCT GCTGGCCCGG CGCGCGGCCC AGCGCGACGC CAGCGAACGC
GAGCTGATCG AGCTGATCGG TTCGGAGATC GAGCGCCTCA ACGGCCTGCT CGACCAGCTG
CTGTCACCGG CCCCGGCCGC GCCGCACGCC GAACTGAACA TCCACGCCGC GCTGGAACGC
GTGCTGCGCC TGGCCGAGAA CGAGGCCGGC TGGGCGGTAC GCCTGCAGCG CGACTACGAC
CCCAGTATTC CCGAATTCCA TGGCGACGCC GACCGCCTCA CCCAGGCAGT GTGGAACCTG
GTGCGCAACG CGATCCAGGC CGGCGCCGGC AACATCACCC TGCGTACCCG CGTAGAACAC
GGCGTACGCA TCGCCGAGCA GTTGCATACG CTGGCGCTTC GCCTCGAAAT CGCCGACGAC
GGCCGTGGTG TGCCAGAGGA ACTGGCCGAG CATCTGTTTC TGCCGCTGGT CAGTGGTCGC
GCCGAAGGTA CTGGCCTGGG CCTGGCGCTG GCGCAGCAGG TCGCGCGCGA ACATCGCGGC
ACACTGACCT ACCGCTCGCG CCCGGGCCAT ACCGTGTTCA CCCTGCTGCT GCCGATCGGC
AACGGTGCCG CCCCGGCCGA GGAGGCCCCG CGCGATGTCT GA
|
|---|
| Protein sequence | MSDPAPPPSL DALGTPLAWA GADGRIIGCN PAFARWLGVS IRRLLGQPLA ALEVQGEALA
HFLARDERDS LRLNRLALAV PGEAPRFAEG WMSRRDDGGW LLEAHPVDEF PGLDPTQALP
SALSAALKGL AHELRNPLAG LKGAAQLLAR RAAQRDASER ELIELIGSEI ERLNGLLDQL
LSPAPAAPHA ELNIHAALER VLRLAENEAG WAVRLQRDYD PSIPEFHGDA DRLTQAVWNL
VRNAIQAGAG NITLRTRVEH GVRIAEQLHT LALRLEIADD GRGVPEELAE HLFLPLVSGR
AEGTGLGLAL AQQVAREHRG TLTYRSRPGH TVFTLLLPIG NGAAPAEEAP RDV
|
|---|
| |