| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_7002 |
|---|
| Symbol | |
|---|
| ID | 8716270 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013733 |
|---|
| Strand | - |
|---|
| Start bp | 24416 |
|---|
| End bp | 24982 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003391744 |
|---|
| Protein GI | 284005926 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 50 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.643238 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATATT CGCAGGCTCA AATTGATAAG ATAGGCAATC TGATGGTTTA TATAACTGAC
AGATTGGGTG CTACGTCAAA AACGAAGCTG CTTAAACTGG TGTACATCAT CGAGGAGGAG
TATATTAAAC AAGCTGGTGT GCCTCTTACT CCCCTGAGTT TTACTCATTT ACCTAAGGGA
CCGGTTTCTA CGTTTATTAA TAATCAGATA AACAAGAATC GAGAACCTTT GAATCGTTAC
GTTCGTATCG ATAAAGTCAA CGATCAGTGC TGGATTAGGC CTATAGTTGA TTTTAGTGAC
GATGAATTCA GTGAATTTGA TTTGCAGGTA ATAAATGAAG TACTTGAAAG GTTTGGACGG
TACAATGCTG ATGCTTTGAT TGATTACACT CATCGAGAAG GAAGTATTTG GAAGCAAATG
CAAGACGAAT TTGGAGGTCC ACCACCAGCT AAGCAAAATA CCCTCAATCT ATTTCGTTTA
CTTGATTCTG AGGATGTTGA CCCTGATCTT CGTGAGAGTG CCAACGAGTA TAAAGCATTC
GTAAACTATC TCAGTGCCCA AGAATGA
|
|---|
| Protein sequence | MAYSQAQIDK IGNLMVYITD RLGATSKTKL LKLVYIIEEE YIKQAGVPLT PLSFTHLPKG
PVSTFINNQI NKNREPLNRY VRIDKVNDQC WIRPIVDFSD DEFSEFDLQV INEVLERFGR
YNADALIDYT HREGSIWKQM QDEFGGPPPA KQNTLNLFRL LDSEDVDPDL RESANEYKAF
VNYLSAQE
|
|---|
| |