Gene Slin_6967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6967 
Symbol 
ID8716230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013732 
Strand
Start bp139066 
End bp140349 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content56% 
IMG OID 
Productenolase 
Protein accessionYP_003391710 
Protein GI284005891 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.330647 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value0.0602458 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTC AAGACATCAG TGCCCTCGAA GTATTGGACT CCCGGGGTAA TCCAACCGTA 
GAAGCTCAAG TCATCCTGGA AGATGGGAGC TGGGGCCAGG CCATCGTTCC TTCAGGAGCC
TCAACCGGCG AAAACGAAGC GGTGGAACTG CGCGATAACG ACCCGCTTCG CTACGGCGGC
AAGGGCGTTC GGCAGGCCGT TGCCAACATT CAGACCCAGA TTCGGAACAG TTTAATTCAG
CGCGATTTTA TGGATCAGTC GCAACTGGAT CATCAACTGA TTGAACTGGA TGGTACGCCG
AACAAGGCCC GATTGGGTGC CAATGCGATC CTGGCCGTTT CGATGGCCTT CGCCCGTGCT
CAGGCTCAAG CACAGCAACT GCCGCTCTAT CGTTACTTAC AAGGGCCCTT TACCGAAGCC
GTCTGGTTGC CTGTACCCTG CATGAACGTC ATCAATGGCG GGCGCCATGC TGACAACAAC
GTTGATTTTC AGGAATTCAT GATTGCCCCT CATCAAGCCG GGTCATTTGC GGAGGCCATT
CAAATGGGCG AAACGGTTTT CCACACCCTC AAAGCGCTGC TCAAGCAACG CGGCCTGAGC
ACCGGCGTGG GCGATGAAGG TGGGTTTGCT CCCGACCTAA AAGCCAACGA AGAGGCCGTT
GACCTGATCT TAGAGGCCAT CACCCGGGCC GGGTACAAAC CGGGTGAACA GGTCAGTTTA
TGCCTCGACC CGGCGGCCAG TGAACTCTGG CAGAATGGTC ATTACCAATT GAGTAAAAGC
ACGGGTCAAA TCTTATCTAC GGAGGCCATG ATCCGGCTCT GGGAGGACTG GACGCGTCAA
TATCCCATCG TTTCGCTGGA AGATGGCCTG GGTGAGCACG ACTGGGAGGG CTGGAAAGCT
CTGACTGCTA CGCTTGGCCA CCGGGTTGAG CTGGTGGGTG ACGATATATT CTGTACCAAC
CCGGCACTGG TTCAGCAGGG AATCGACCAG AAAATAGGCA ATGCGGTGCT CATCAAGCCC
AACCAGATTG GCACAGTGAC CCAGACACTC GATACGGTCA GGCTGGCGCA GCAAAATCAG
TACCGAATCT TCATCTCGCA CCGGAGCGGA GAGACCGTCG ACACATTTAT TGCCGATCTG
GCGGTAGCGA CCAGCGCAGG AGCCATTAAA ACCGGGTCGG GTTGCAGGGG GGAACGGACC
GAGAAGTTTA ACCAGTTTTT GCGCATCGAG CATCGGCTGG GGGCGGCTGC TCGCTTTGCG
GGCCGGGATG CGTTTGGGCA GTGA
 
Protein sequence
MKIQDISALE VLDSRGNPTV EAQVILEDGS WGQAIVPSGA STGENEAVEL RDNDPLRYGG 
KGVRQAVANI QTQIRNSLIQ RDFMDQSQLD HQLIELDGTP NKARLGANAI LAVSMAFARA
QAQAQQLPLY RYLQGPFTEA VWLPVPCMNV INGGRHADNN VDFQEFMIAP HQAGSFAEAI
QMGETVFHTL KALLKQRGLS TGVGDEGGFA PDLKANEEAV DLILEAITRA GYKPGEQVSL
CLDPAASELW QNGHYQLSKS TGQILSTEAM IRLWEDWTRQ YPIVSLEDGL GEHDWEGWKA
LTATLGHRVE LVGDDIFCTN PALVQQGIDQ KIGNAVLIKP NQIGTVTQTL DTVRLAQQNQ
YRIFISHRSG ETVDTFIADL AVATSAGAIK TGSGCRGERT EKFNQFLRIE HRLGAAARFA
GRDAFGQ