Gene Slin_6965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6965 
Symbol 
ID8716228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013732 
Strand
Start bp137608 
End bp138384 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content54% 
IMG OID 
Productmajor intrinsic protein 
Protein accessionYP_003391708 
Protein GI284005889 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.113023 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value0.0476417 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCAG AAGAGTGGAA AGCGGTAATC GCGGAAGGAA TTGGTACGGC CTTGCTGGTT 
TTCGGAGGCA TATCGTTTGT CATTATTGAC TTCGGACCTG GAAGTATTGT AGCCAGTTAC
GTGCCTGACG CGATGGTGCG TCGGTTTGTT ACCGGCTTTT TGTTTGGCAG CGTTGGGTGC
CTGATCACGT TGTCGCCCCT GGGACGTATC AGCGGGGCGC ATCTGAATCC AGCAGTCACT
ATCGCTTTTT TTGGACGAGG TTTACTGCCA TGGCGGGCGT TGTTTGGCTA TATTATTGCT
CAACTAGCAG GCGCTACGCT CGGTGCGGGA GCGCTGGCGG TATGGGGATC GATGGGTGAT
AGTCTACGCG AAGGAATAAC CGTACCGGGA CATAACGTGG GGACGGCATT TGCGGGTGAA
GCATTCGTTA CGTTTTGTCT GATCTGCGTG ATTTTACTGT TCACCAGCCA TGACCGACTG
AAAGCCTATA CCCCTTTCAT GATACCACCA TTGTTTTCGG TGCTGGTCGG TCTGGAAGCG
CCCCTGTCCG GGTGCAGCGC CAACCCAGCC CGTAGTTTTG GCCCCGCCGT TTGGAGCGGT
ATCTGGACTG ACCACTGGCT TTACTGGCTG GCCCCCGTAA CGGGTACATT TGGCGCTCTG
CTTGTATTTG CTCTTCCTGT GCTGCAATGG CTGCGAACGG ATATTGCCAA ATTGTATCAT
TTCCGGCATG ACGAAACGGG ATTTTTGCGG GGGCAGGAGC AACCAGCCAG TATTTAA
 
Protein sequence
MKPEEWKAVI AEGIGTALLV FGGISFVIID FGPGSIVASY VPDAMVRRFV TGFLFGSVGC 
LITLSPLGRI SGAHLNPAVT IAFFGRGLLP WRALFGYIIA QLAGATLGAG ALAVWGSMGD
SLREGITVPG HNVGTAFAGE AFVTFCLICV ILLFTSHDRL KAYTPFMIPP LFSVLVGLEA
PLSGCSANPA RSFGPAVWSG IWTDHWLYWL APVTGTFGAL LVFALPVLQW LRTDIAKLYH
FRHDETGFLR GQEQPASI