Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6965 |
Symbol | |
ID | 8716228 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013732 |
Strand | + |
Start bp | 137608 |
End bp | 138384 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | major intrinsic protein |
Protein accession | YP_003391708 |
Protein GI | 284005889 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.113023 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 0.0476417 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGCCAG AAGAGTGGAA AGCGGTAATC GCGGAAGGAA TTGGTACGGC CTTGCTGGTT TTCGGAGGCA TATCGTTTGT CATTATTGAC TTCGGACCTG GAAGTATTGT AGCCAGTTAC GTGCCTGACG CGATGGTGCG TCGGTTTGTT ACCGGCTTTT TGTTTGGCAG CGTTGGGTGC CTGATCACGT TGTCGCCCCT GGGACGTATC AGCGGGGCGC ATCTGAATCC AGCAGTCACT ATCGCTTTTT TTGGACGAGG TTTACTGCCA TGGCGGGCGT TGTTTGGCTA TATTATTGCT CAACTAGCAG GCGCTACGCT CGGTGCGGGA GCGCTGGCGG TATGGGGATC GATGGGTGAT AGTCTACGCG AAGGAATAAC CGTACCGGGA CATAACGTGG GGACGGCATT TGCGGGTGAA GCATTCGTTA CGTTTTGTCT GATCTGCGTG ATTTTACTGT TCACCAGCCA TGACCGACTG AAAGCCTATA CCCCTTTCAT GATACCACCA TTGTTTTCGG TGCTGGTCGG TCTGGAAGCG CCCCTGTCCG GGTGCAGCGC CAACCCAGCC CGTAGTTTTG GCCCCGCCGT TTGGAGCGGT ATCTGGACTG ACCACTGGCT TTACTGGCTG GCCCCCGTAA CGGGTACATT TGGCGCTCTG CTTGTATTTG CTCTTCCTGT GCTGCAATGG CTGCGAACGG ATATTGCCAA ATTGTATCAT TTCCGGCATG ACGAAACGGG ATTTTTGCGG GGGCAGGAGC AACCAGCCAG TATTTAA
|
Protein sequence | MKPEEWKAVI AEGIGTALLV FGGISFVIID FGPGSIVASY VPDAMVRRFV TGFLFGSVGC LITLSPLGRI SGAHLNPAVT IAFFGRGLLP WRALFGYIIA QLAGATLGAG ALAVWGSMGD SLREGITVPG HNVGTAFAGE AFVTFCLICV ILLFTSHDRL KAYTPFMIPP LFSVLVGLEA PLSGCSANPA RSFGPAVWSG IWTDHWLYWL APVTGTFGAL LVFALPVLQW LRTDIAKLYH FRHDETGFLR GQEQPASI
|
| |