Gene Slin_6959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6959 
Symbol 
ID8716222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013732 
Strand
Start bp132252 
End bp132986 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content56% 
IMG OID 
Productphosphoesterase PA-phosphatase related protein 
Protein accessionYP_003391702 
Protein GI284005883 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value0.190723 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value0.122006 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAAC AGCTTATTTT TTTAGTCATC CTGACGACGT TTCCGCTTTC TGTCACCCAG 
GCTCAGTCCG ATACAACCCG TGCGTCTGCG GCCGCAACCC GCGCGGTTTT TCAACCCTCG
GCCTACATCG TACCCGTTGG CTTGATGACG GCGGGGCTGA TCACGCAGGG AGCTATCAGC
CGCCATGTTC AATCAGAGGT AGTTGGACGG TATCCCGGCT TTTCGTCGCA TGTGGATGAT
GTCGGTCAGT TTGTGCCCAC ACTGGCCGTG TTGGGTCTGG GTGCTTTGGG GATAAAGGGA
AAGCACGCTT TTGGGGATCA GGTGGTTCTT ACTATTTTGT CGCACGGGGT CGCACAGGCG
ATTACGCAGG GACTAAAGTA CACTGTTGCC TACCCCCGGC CCGATGGCGT AGGTAACGAG
TCATTCCCAT CGGGCCATAC GTCATTTGCC TTCACGGGTG CCGCCCTGCT GGCTCAAGAA
TACGGCGAAC GTAGTGGTTG GTACAGCGTT GCAGGCTACG GTATGGCCAC GACAGTGGGC
GCGTTGCGGG TAATGAAAAA CCGGCACTGG CTGGCCGACG TTCTTTTTAG TGCGGGGGTG
GGTATCGGCT CAACCGAGCT GGTCTATCAA CTTTATCCAT GGCTCCGCCG GGTCGTCTTT
CACAAAAAGA ACATGGCCTT AGTGCCCATT TACACAGGTT CCAGCACGGG GGTATGCATG
ATGGCGGTTT TTTAG
 
Protein sequence
MMKQLIFLVI LTTFPLSVTQ AQSDTTRASA AATRAVFQPS AYIVPVGLMT AGLITQGAIS 
RHVQSEVVGR YPGFSSHVDD VGQFVPTLAV LGLGALGIKG KHAFGDQVVL TILSHGVAQA
ITQGLKYTVA YPRPDGVGNE SFPSGHTSFA FTGAALLAQE YGERSGWYSV AGYGMATTVG
ALRVMKNRHW LADVLFSAGV GIGSTELVYQ LYPWLRRVVF HKKNMALVPI YTGSSTGVCM
MAVF