Gene Slin_6958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6958 
Symbol 
ID8716221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013732 
Strand
Start bp131759 
End bp132187 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content51% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003391701 
Protein GI284005882 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.0605312 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value0.141426 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACGT ATGTCATTGT CAGCGCCCTG CTTTTGGGCG CGACATTCAC TGATGGGTCA 
GCCCAGTCAG CGAGTACCAA CCGGGTGCCG CGGACCGTAA AAACGGCGTT TACGAATACG
TACGCTACAG CCAGGCAGGT AAAGTGGGAT CGGGAAGGAA AAGATTGGGA AGTGTCATTC
ACGTTGAACG GCGAAAAAAA ATCGGCGCTT TTCAACCCAG ACGGTCAGCA AATCGAACTT
GAAACGGAAA TTTCGGTAGC GAAGCTTCCC CAATCCGTGC GAAGCTATAT GGATGGTCAG
AAAAAACCCA TTGCCGAAGC GGCCGAAATT ACCGATGCGA TGGGGAAACG TTATTATGAG
GCTGAATCGG GGGGTAAGGA TTACCTGTTT ACCGCCGAGG GCAAACCGGT GAAAAAGATC
GGCCAGTAG
 
Protein sequence
MKTYVIVSAL LLGATFTDGS AQSASTNRVP RTVKTAFTNT YATARQVKWD REGKDWEVSF 
TLNGEKKSAL FNPDGQQIEL ETEISVAKLP QSVRSYMDGQ KKPIAEAAEI TDAMGKRYYE
AESGGKDYLF TAEGKPVKKI GQ