| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6944 |
|---|
| Symbol | |
|---|
| ID | 8716208 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013732 |
|---|
| Strand | - |
|---|
| Start bp | 116216 |
|---|
| End bp | 117163 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | sodium/calcium exchanger membrane region |
|---|
| Protein accession | YP_003391688 |
|---|
| Protein GI | 284005869 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 72 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCAACT CACTATCACT ACCCGTCCTG CTCCTGGTTT TTGTCGGAGC CACAGCCCTC
GTCTGGCGGG CTGGTATCGC CCTGTCTACT ACCACCGATT CGCTCGACAA ACATTTCAAA
TTAGGCGAAG CATTGGGTGG TATCCTTATT TTGGCCATCA TCACCAACCT GCCTGAAATC
GCTATCACCG TCAGTACGGC TATCAACAAC AAAATCGAGT TGGCAGTGGG TAATATTCTG
GGCGGTATTG CCCTGCAAAC CCTCGTACTG GTACTGCTCG ATGCGGTGGG CGTGGGTAAA
CAGGACACAC TTACCGCGAA GCAATCGTCG CTGACGCCGG TGCTGGAAGG AGCACTGGTC
ATTGCTATGC TGAAACTGGT TGTCATGGGC CATCAGCTCC CGAAAGATCT TGTTTTTGCC
CGGCTCACAC CCGATAGTCT GTTGCTCGTC GGTACATGGA TAGTGGGCGT CTGGCTAACG
GGCAAAGCCC ATAAGGGGCT TTTCTGGCAG ACAGATACAG CCAGGAACGT TTCCAAAAAA
GACGCTCAGT TCGATAAACG TAGCACCGAT AAAACCCTGC TCATATTCGG CCTGGCAGCT
CTGGCGACAC TGGCGGGCGG AGTAGCCCTG GAAGAAAGTG GTGACGTAAT GTCAAAGAAG
CTGGGTATGG ACGGGGTTAT CATCGGGTCT ACCGTACTGG CAGCAGCTAC CTCCCTGCCT
GAAGTCTCGA CGGGTCTGGC CTCCGTCAGA AGTAAGGAGT ATACGCTGGC GATCAGCGAT
ATTTTCGGGG GCAACGCGTT TCTACCCGTG CTGCTGGTCG TGGCAACAGT CATCTCGGGT
AAACCCGTGC TGCCTACCGC CCAGAAAAGC GACATCTACC TCACCGGACT AGGTATGCTG
GTCACGATTC CTTACCTCTA CGGTGCGCTG TTCTGGCCCA AACGCTAG
|
|---|
| Protein sequence | MVNSLSLPVL LLVFVGATAL VWRAGIALST TTDSLDKHFK LGEALGGILI LAIITNLPEI
AITVSTAINN KIELAVGNIL GGIALQTLVL VLLDAVGVGK QDTLTAKQSS LTPVLEGALV
IAMLKLVVMG HQLPKDLVFA RLTPDSLLLV GTWIVGVWLT GKAHKGLFWQ TDTARNVSKK
DAQFDKRSTD KTLLIFGLAA LATLAGGVAL EESGDVMSKK LGMDGVIIGS TVLAAATSLP
EVSTGLASVR SKEYTLAISD IFGGNAFLPV LLVVATVISG KPVLPTAQKS DIYLTGLGML
VTIPYLYGAL FWPKR
|
|---|
| |