Gene Slin_6848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6848 
Symbol 
ID8716116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013732 
Strand
Start bp16496 
End bp17764 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content49% 
IMG OID 
ProductDNA-directed DNA polymerase 
Protein accessionYP_003391596 
Protein GI284005777 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value0.615058 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value0.214932 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATAGCCT TAGCCGATTG CAATAATTTC TACGTGTCCT GCGAACGGAG TTTCAATCCG 
TCGCTAAACG GCCAACCCGT CGTCGTGCTC TCAAACAACG ATGGTTCGAT TGTAGCAAGA
AGCAATGAAG TGAAAAAATT GAACGTAGGT ATGGGTCAGC CATTTTTCGA GATCGAGAGG
CTGCGGCAGG AGCACGGCAT CCACGTTTTT TCCTCGAACT ACGTGCTGTA CGGTTCCATG
AGCGCACGGG TTATGGCCAT CTTCGGGCGT TTTGTCGAAG ATGTTGAGGT ATATAGCATT
GATGAAGCGT TCTTCGACCT GAATGGTTAC GAATCCATTT ATCCTGACCT AACGACCTTT
GCCCACAACC TACGCTCGAC AGTAATGCAA TGGACTCGTA TCCCGATCAG CATTGGTATC
GCTCCGACGA AAACATTGGC GAAGGTGGCC AACTGGTATG CGAAAAGGCA ACCTGACGCA
AGTGGAGTAT GTATGCTCTC AACGCCTGAG CAGATCCGTC AGGCACTGGA GCAACTATCA
GTTGACGAAT TGTGGGGTAT CGGCCGACGC TATGCCAGTT TTTTAAAACA GAATGGCATC
AAAACCGCCC TCGAATTTAG CCAATGCCAC GACGTGTGGG TACAAAAACA CTTCACCATC
AACGGCCTCC GGTTAGTTTA TGAACTCCGG GGGGAGGTCT GTCGAACGGT TGAGACGCAA
CCATCGGCCC GTAAGTCGGT ATGCGTGGCT CCAAGTTTTG GGGAACTTGT CGGCGACCGG
CCAACACTGT ATGAAGCTCT GACCAACTAT GTCGCTCGTG CTTCGGAGAA GCTACGCAAA
CAGCGGCTTG CTGCCGGGGC GATGACTGTT TTTCTGCATA CGAATCGATT CCGGGCGGCT
GTCGGACAGT ACTCCAACAG CCGTTCATTT ACCCTACCTG TCCCTACTAA CCTAATACCT
GAACTATCGC ACTACGCGAT AAAGGCACTC GACAGCATCT ACAAATCTGG CTACGCTTAT
CAGAAAGTTG GCCTGATCTT GTCAGCTCTT CAACCTGACA CGCACCAAAC CCCCGACGTA
TTTGAAGGAG AGTTAGACCC GCGTTTACTG AAGCTTCTTC CCACAGTTGA ACGACTTAAT
AGTAAGTTAG GACGCGACAA AGTACGTTTT GCAGCACAGG GGTTTAATCA TCTCTGGAAG
ATGAAACAAC GCTGGTTATC ACCCTGTTAT ACAACACATT GGAAAGATAT TATTATTACA
AAAAATTAA
 
Protein sequence
MIALADCNNF YVSCERSFNP SLNGQPVVVL SNNDGSIVAR SNEVKKLNVG MGQPFFEIER 
LRQEHGIHVF SSNYVLYGSM SARVMAIFGR FVEDVEVYSI DEAFFDLNGY ESIYPDLTTF
AHNLRSTVMQ WTRIPISIGI APTKTLAKVA NWYAKRQPDA SGVCMLSTPE QIRQALEQLS
VDELWGIGRR YASFLKQNGI KTALEFSQCH DVWVQKHFTI NGLRLVYELR GEVCRTVETQ
PSARKSVCVA PSFGELVGDR PTLYEALTNY VARASEKLRK QRLAAGAMTV FLHTNRFRAA
VGQYSNSRSF TLPVPTNLIP ELSHYAIKAL DSIYKSGYAY QKVGLILSAL QPDTHQTPDV
FEGELDPRLL KLLPTVERLN SKLGRDKVRF AAQGFNHLWK MKQRWLSPCY TTHWKDIIIT
KN