Gene Slin_6745 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6745 
Symbol 
ID8716011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013731 
Strand
Start bp108388 
End bp110454 
Gene Length2067 bp 
Protein Length688 aa 
Translation table11 
GC content57% 
IMG OID 
ProductNAD+ synthetase 
Protein accessionYP_003391500 
Protein GI284005680 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.960806 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTTT TGAAAGTAGC TGCAGGGGCG TTGAATCAAA CGCCCCTGCA CTGGGAACAC 
AATACCCAAA ACATTATCAA CGCCATTGCA GCTGCCCGCG CGCAGCAGAT CAGCCTGCTT
TGCCTGCCCG AACTCTGTAT TTCGGGTTAT GGCTGCGAAG ATGCCTTCTA TGCCCAAAAC
ACCATCGACC AGGCCATTCG GTCGTTGCTC GACATTGTGC CGCATACGGC GGATATACTC
GTATCGGTCG GCTTGCCCAT GCGCCACGGC AACCGAACCA TCAACACGGC TTGCCTGATG
AGCAACCGGC GCATCCTGGG ATTTGTGGGC AAACAGCATT TGCCCAACGA CGGCATTCAT
TACGAAGAAC GGTGGTTTCA ACCCTGGCCC GCTGGGGTGC GTGATGAGTT GACATTACTG
GATGGCGCAA CGGTTTATCC AATCGGTGAT CTGCTCTTCG AGATTTCCGG TATCCGCATC
GGCTTTGAAA TTTGCCAGGA TGCCTGGATC GCCGGACGAC CAGGGCGAAG TCTCTATGAT
CGGGGGGTGG ATATTATCCT CAATCCGTCG GCCAGCCATT TTGCCTTCTT CAAATCCGAA
GTGCGGGAAC GGTTGGTGGT GGATGCATCG CGGGCTTTTG GGGTGAGCTA CATCTATACC
AATCTGCTGG GCAATGAGGC CGGGCGGGTG ATTTATGACG GGGATGCGAT GGTGGCATCC
AATGGGGTGC TGCTGGTGTC CGGGGCACGG CTCAGCTACG AAGATTTTGT GCTGGTTTCG
GCGGTGGTGG ATGTCGAACA AACCCGGTTG AGCCAGGTGC AGAGCCGGGG CACCCTGACC
CGGATGTATC CCGAATTGCG GGTGATCGAG CGGTTCGACT GGCCACGGGT GGGCCCTGTA
GTGCAGCAAG CGGAGCTGGA AGCCTGGGAG AAAGGCGGCT ATCTGAAAGA AGAAGAGTTT
GCCAGGGCGG TTGCTCTGGG GCTGTTCGAT TATCTGCGCA AGAGCCGTTC GCAAGGCTAT
GTGCTTTCGC TCAGTGGCGG GGCTGATTCG TCGGCCATTG CGGCCACGGT GTATTTGATG
ATCCGCATGG CGGTCGAAAC TATCGGGCTG GAAGGGGTTA AGAAAAAGCT GGCCTATATC
CGGGCCATTC AGGATTGCAC CACACCCGAA GCGATGATCG GCCAATTGCT GACGGTCATG
TATCAGGGCA CGGAAAATTC CTCCGATGAT ACGTTCAACT CAGCCAAACA GCTCGCCGAC
GACATTGGCG CGACGTTTCT GCGCATTAAC ATCAACGGCC TGGTGGAAAC CTATCGCGGC
CTGGTCGAAG AGCAATTGGG CCGGGTGCTC TCCTGGGAAA CCGACGATAT TGCGTTGCAA
AATATTCAGG CGCGGGTGCG TGCTCCGGGC ATCTGGTTAA TCGCCAATCT AAAAAATGCG
CTGCTGCTGA GTACGTCGAA CCGCTCGGAA GCAGCGGTGG GTTATGCCAC GATGGATGGC
GATACGGCGG GCAGCATTTC GCCCATTACC GGCATCGACA AGCACTTTCT GCGGGGCTGG
CTGCGCTGGC TGGAAACGGT GGGGCTGAAC GTCAAGAACC AGACCATCCC CACGGATCGC
ACCAGCCAGG GGCCGGGGCC GGTCGGGGCC GATGAGCTGA TCCGGGTCAA GGGGCTTCAT
GCGGTCAACA ACCTGCAACC CACGGCGGAG CTGCGCCCGC TGGACAAAAA GCAAACCGAT
GAAGATGATT TGATGCCCTA TGATGTGCTC AATTCCATTG AGAACGCGGC CATTCGGGAT
AAACAAGCCC CGCTAGATGT GCTCTTACTG CTGGAAATTC GGTATGCGGA TCGGTACGAA
CGGGCCAAAT TAGCGGTGTG GGTTGAGCGG TTTTTCAAAC TGTGGAGCCG CAACCAATGG
AAACGCGAAC GCTATGCCCC TTCCTTCATG CTGGACGATC ACAATCTCGA TCCGCGTTCC
TGGTGTCGGT TTCCGATTCT GTCGGGCAGT TTCGAGCGGG AGCTTGCCGA TATGGTTGAC
TGGATAAAGC GCGACAATCC ATTGTAA
 
Protein sequence
MKLLKVAAGA LNQTPLHWEH NTQNIINAIA AARAQQISLL CLPELCISGY GCEDAFYAQN 
TIDQAIRSLL DIVPHTADIL VSVGLPMRHG NRTINTACLM SNRRILGFVG KQHLPNDGIH
YEERWFQPWP AGVRDELTLL DGATVYPIGD LLFEISGIRI GFEICQDAWI AGRPGRSLYD
RGVDIILNPS ASHFAFFKSE VRERLVVDAS RAFGVSYIYT NLLGNEAGRV IYDGDAMVAS
NGVLLVSGAR LSYEDFVLVS AVVDVEQTRL SQVQSRGTLT RMYPELRVIE RFDWPRVGPV
VQQAELEAWE KGGYLKEEEF ARAVALGLFD YLRKSRSQGY VLSLSGGADS SAIAATVYLM
IRMAVETIGL EGVKKKLAYI RAIQDCTTPE AMIGQLLTVM YQGTENSSDD TFNSAKQLAD
DIGATFLRIN INGLVETYRG LVEEQLGRVL SWETDDIALQ NIQARVRAPG IWLIANLKNA
LLLSTSNRSE AAVGYATMDG DTAGSISPIT GIDKHFLRGW LRWLETVGLN VKNQTIPTDR
TSQGPGPVGA DELIRVKGLH AVNNLQPTAE LRPLDKKQTD EDDLMPYDVL NSIENAAIRD
KQAPLDVLLL LEIRYADRYE RAKLAVWVER FFKLWSRNQW KRERYAPSFM LDDHNLDPRS
WCRFPILSGS FERELADMVD WIKRDNPL