Gene Slin_6651 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6651 
Symbol 
ID8715918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013731 
Strand
Start bp11605 
End bp12366 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content54% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003391407 
Protein GI284005587 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.240923 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.142646 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACG AACGAACTAT TATCGGTGGG CTGCTTGCCT TTCAGCTTGT ACTGTGGCTA 
GGCTTCCTGT TTCATCATTC ACCGCGCTTC CCTGGTAGTC TGACGGGCGG AGTTCTAGCC
GTGTTAGGCG CGTTGCTGAT GATTTTACCG CCCCTGATCT ATTCTGCCGT GAAGCGGATT
GAGGGGGTTA AGCAATTCGT CACGAAGCGC GTTTCGCTCG GTACCCTGCT GACGGGGCAC
GTCTATACGG GTATCATCGG CTCGATTCTG GCGATTCTGC ATACGGGCCA CCATTTTCAA
AACAACCTCG GTATCTGGCT GACGGCCATG ATGCTGCTAA CGGTATTCAG TGGCTTCGTC
GGGCGGTATT ACCTGGCGTA TGCGTCGATG GAAGTGCGCG AGAAAAAAGA CCTGCTCAAT
AGTCTGGCCA CCGAGTATAA CCAACTAACA GCGGCAATGG CACAGCCGCA GAACGCCGAC
ATGACCTACG TGGCCTCCCA TGATGTTGTG GGCCGCGACT TGAACAGTTT TTGGGGAACC
GAGCCTGCGG TGGTTGACCT AAATGCCCCG CTCAAACTCC GCGCCGAGCG GCTGACCGAA
TCAATCGCCG ATCTCGAATA CGCCATAGCG ACGCACGATA TCCTGAAACG ACGCACGACC
TACTGGCTCG TCGCCCATAT TGCCACGTCG AGTGCCTTTT ATGTACTGCT CGTTTTCCAC
ATCTGGTCAG CGATTTATTT CGGACTGCGA TGGTTCAACT AA
 
Protein sequence
MKNERTIIGG LLAFQLVLWL GFLFHHSPRF PGSLTGGVLA VLGALLMILP PLIYSAVKRI 
EGVKQFVTKR VSLGTLLTGH VYTGIIGSIL AILHTGHHFQ NNLGIWLTAM MLLTVFSGFV
GRYYLAYASM EVREKKDLLN SLATEYNQLT AAMAQPQNAD MTYVASHDVV GRDLNSFWGT
EPAVVDLNAP LKLRAERLTE SIADLEYAIA THDILKRRTT YWLVAHIATS SAFYVLLVFH
IWSAIYFGLR WFN