| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6504 |
|---|
| Symbol | |
|---|
| ID | 8730290 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 7894704 |
|---|
| End bp | 7896224 |
|---|
| Gene Length | 1521 bp |
|---|
| Protein Length | 506 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | proton-translocating NADH-quinone oxidoreductase, chain N |
|---|
| Protein accession | YP_003391260 |
|---|
| Protein GI | 284041330 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCCACTTA CCGACCAATT AAACGATATT TTAAGCAGCC TCGGGGGTTT CGGACCGGAG
ATTTGGCTGT CTGTAGCTTT TTGTGTTGTG TTAGTTGCCG AACTCCTTCT GGTTCGGTCA
TTAGCCTTAC CCAAAGCTCG TTTATACCTG GCTGGATTAA GTGTTTCCGT ATTGCTGGTG
GCTGGCGGCT GGGCCGTGCT CTTGCCCACG CGCGGGTTTC TGTTCATGCA TCTGCTCTTT
GTCGATCAGC AGGCCATCTT TATTCAGATG GTCGTTGCCC TGAGCGCCGT GTGTGTTGTG
TTGTATGAAG CGTTTACATC GCCCATCAAT CAGGCCATCG ACCGGCCGAA ACTGCCGCTG
GAGTGGTACT CCCTGCTGAT TGCCATGACG CTCGGGTTAT TCCTGATGAC TTTGTCCGTC
AACATGCTCA GCATCTACCT GAGCATCGAA CTGGTTTCCA TCGGCTCTTA CTTACTGACT
GCCCTCACCG CCGACCGAAA AGCTTCCGAG GGTGGTATCA AATACCTGCT GTTCGGGGCT
ATCAGCTCGG CCGTTATGCT GTATGGTATG TCGTTGCTGT ATGGCATGAC CGGCACCCTC
GACCTCACCG CTGAAGCATT CGGAGCGGAG CTGGCCCGGC AGGACGGGGC CGTTGTTGCC
GTAGCCATGC TGCTGACGCT GGCCGGATTG TTGTTCAAAC TGGCTGGCGT GCCGTTTCAC
GTCTGGACCC CCGATGCCTA CGAAGCAGCC CCCGTGCCGG TAGCCGCTTT TTTTTCGGTG
GCCCCCAAAG CTGCTGCGGT GCTGGTGTTG ATGCGGGTCG TAACGGCCCT GCCCATCGAA
GTTCCGGCGG GCGGTACAAC GGCCGTTGTA CTACAAACGC CACTGGCCGT TCTGGCGCTG
GCGGGTATCC TGATCGGTAA CCTGTCGGCT CTGCGGCAAA CGGATGCCAA GCGGCTGCTG
GCGTATTCGA CCATTGCTCA TGCCGGTTTT CTGCTGGTAG GGGTAGTCGC GTTCAACGAA
GCGGGTTTCG AAGCGGTATT GTTTTACATC GGTACTTACC TGTTTATTTC GCTGGCTGCT
TTCTTCCTCA TCGACCTGCT GGCCCGAAGT AATGGAAGCC AACTGACAAT CAAAAATTTT
GCCGGTTTAG GGGCCAGACA ACCGTTACTG GCCGTTGCGC TGACGGTCGT GATGCTGGCC
CTGACGGGTC TGCCGCCAAC GGTTGGGTTC ACGGCGAAAC TCCTGTCGTT TTCCGCCCTG
TACGACGCCT ACCAGCAATC CGGGGATGGC TGGCTGCTGG CGCTGTTTGG CCTGGGTTTA
CTTAACGCCC TGGTTTCGCT GGTCTATTAC CTTAAAATTC CGTTCCTGTT ATTTTTCCGT
CCGACAGATG AAGCTCCCGA ACAGAATGTC CCTGCCCGCC TGCCCGTAGC AGCGGTCTGG
CTAGCTGTTG GGCTGGTGAT ACCGATCATC GTGTTATTTA TGAAACCCGA TCTGTTACTC
AACCTCATTA CGGTTCGATG A
|
|---|
| Protein sequence | MPLTDQLNDI LSSLGGFGPE IWLSVAFCVV LVAELLLVRS LALPKARLYL AGLSVSVLLV
AGGWAVLLPT RGFLFMHLLF VDQQAIFIQM VVALSAVCVV LYEAFTSPIN QAIDRPKLPL
EWYSLLIAMT LGLFLMTLSV NMLSIYLSIE LVSIGSYLLT ALTADRKASE GGIKYLLFGA
ISSAVMLYGM SLLYGMTGTL DLTAEAFGAE LARQDGAVVA VAMLLTLAGL LFKLAGVPFH
VWTPDAYEAA PVPVAAFFSV APKAAAVLVL MRVVTALPIE VPAGGTTAVV LQTPLAVLAL
AGILIGNLSA LRQTDAKRLL AYSTIAHAGF LLVGVVAFNE AGFEAVLFYI GTYLFISLAA
FFLIDLLARS NGSQLTIKNF AGLGARQPLL AVALTVVMLA LTGLPPTVGF TAKLLSFSAL
YDAYQQSGDG WLLALFGLGL LNALVSLVYY LKIPFLLFFR PTDEAPEQNV PARLPVAAVW
LAVGLVIPII VLFMKPDLLL NLITVR
|
|---|
| |