| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6482 |
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| Symbol | |
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| ID | 8730267 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 7862881 |
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| End bp | 7866027 |
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| Gene Length | 3147 bp |
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| Protein Length | 1048 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | |
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| Product | virulence protein SrfB |
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| Protein accession | YP_003391238 |
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| Protein GI | 284041308 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATACAG CTTCACTAAT TGCTAACTCT GGTATCCAGT TTATTGATAT ACCGCTCAAT
CTGGGTGACT CATCACCAGC CCCTCGGTTG CGCTTTGAAT ATGTTGAACA GGACGACCCG
GAAGCTGATC GAGTGTATCT GGTTATTCCA CATCAACTCG AAAATGGGCG TTATGTCAGC
CGACTCGATC TGAACGTGGA GGCTTTTATG ACCGACGGTA CAATCGATGA AAGTAAAATC
CTGCCCGAAA CCCTGCAATA TCTCCGCGAA GATCACCTGA TAACGATTCA GGGACGCGAT
GCCCTGAACG TGCTGGAAGG CGTCTGGTTA CCATTGCCCT ATTTTCGCAC CGACCATTAC
CATGCCAACC CCCGCAAACT GCTTCCTGGA CCACAATCCT GGGCCAGAAT GTATCTTGGC
AAAATCCCAA CAACGGAGCG AACCGAAAAC AGCAACTATA CCCATAAACT GGTATTGGCT
TTTGATACAC GCTGCGACGA CGAAGACAAC CCGCAAATCA ACCATACCAA TTATTTGATT
CCTGATAGTC GTGACCAGCA AAGCGGAGAG CGTTTTGTCT GCGCTACCCA TGAAGACGCC
AACGGTTATT TCCTATCACA AAAACGGGAG TGGCTGGAAG AGGTGCTGGT GAAGAATCAG
AAGCGTGTTC CGCGTCAGTT AGCGAACGAA CAGCATTATC TGCTTCATAT GGGTCTCTAT
ATGACCCTCC TGAAATTATT AGGGCAGGCG GGCGGCTTTC CAGTAATTAC CATGCAGGAT
AATGCACTCG GCCGGAGCCT GGATATCAAT CTGGTACTCG ACGTGGGTAA CTCGCGCACC
TGCGGGCTGG TCCTTGAAAA TACAGCCCGC GAGCGACCCG CCGAACTGGC CCTGACCGAT
GCCCGACGGC TGAAAATCCG TGAACTCTGG AATCCTACTC AAAGTAATAG CCAGCCTTTT
GATATGAAGC TGGCCTTTAT GGAAACGTCG TTTGGCAAAG CAGAAGGGCT TTCGGATGAA
TACCTCTTCA GGTGGCCCAG CTTAGTGCGT GTAGGCCCGG AAGCGACGCG ATACGGAATC
ATTTTTGGCG ACAACCAGCC CCTAAACGGA GTGTTTGAAA TGACGTCGTC CAGCCCTAAA
CGGTATCTCT GGGATACCCA TAGGCGGAGC AAACCCTGGG GTTATTTTTC TGAAAATGCC
GAACTCCTTC AGCGGTCAGC AGCTAGTTTA CCTCTGGCTC ATCGCTTCAC CACAGATGGT
CGACTACTAA CTAAAGCCAA CCAGCAGGCG CTTGCCGAAG GGAAACCCCC TTATGCAACC
ATGCAGGAGC CGCTGTTTTC GCGAAGTTCA CTCATGACCC TGGCGCTAAC CGAAATTCTG
CTTCAAACAC TCTGCTATAT CAATAGCTAC GAATTTCGTC AGGAACGTGC GGAAGAGGGT
GTACCCCGTC GTTTACGGCG CATTGTGCTT ACCTGCCCAA CGGCAATGCC CAAAACAGAA
CGGATTAAAC TCCGCGAATG TGCCGCCGAC GCGCTTCAGG CGTTACGGGA ATACTATGGC
GAAAACTACA AACTCATTGC CCCGGAACTA GAGATTATTC CTGACTATGA GCAATTGGCC
GAACAGGATA AAGACCAGGA ACAGGTACCT CAGAATCTGC GGGAACTCCG CGAGAACTAC
AATCCTCAAC GGTTAAAAAC GCACTGGAGC TACGATGAGG CCACCTGTAG TCAACTCGTT
TTTCTATACA ACGAAATTGT GCATCGGTTT GGCTCCGAAA ACGCACCATT GCTCTTTGAA
ACGATGGGCC GCCATCGGGC AGGGAATGCA GATGGGCGCA AATCACTGAT GGTAGCCAGT
GTCGACATCG GGGGTGGAAC TACCGATTTG ATGATCGGCC ATTATGAATA TGAGCCCGGA
GCAGTTACTA GTTTATTCCC GAATCCAATA TTCTGGGAAG GGTTTAATCT GGCAGGCGAT
CAAATTCTGA AAAAACTCAT TGAAGAATGT GTGCTGCCCC AAATTGCTCA GGAAGCCCGA
CGGTTGGGCG CTCAGCGGTC GGGCTCTGTT CTGTATAGTC TCTTCGGCCC CTATCAACAC
AGCGACAGTG AAGCGAAACG AACCCGCAAA AAACTATTTG CTGCTCAAAT TGCCACCGTA
ATAGCCCAGG GCATGCTGAA TCAGATTACT ACCTATCCCG ATCAGGTAAG GCAGGTTGCA
TTCGATGAGT TTTTTGAAGA ACATGAAGCC CCTATTCCGG CTGTGATCGA CTACATCAAT
GAAGGATTCC GGCAGGTTGG AGCCGTTGGG TTCGATATCC GGCTGATGAG CTGGGAAGTG
TCGCCGACAG AGATTAACTA TAAGGCTATC CGAAATGTGA TCGGTACGAT GTTACGCGAT
TTATGCGGAA TCATTTCCCA GTACGGTTGC GACTATGTGT TGTTATCGGG TCGCCCATCC
ACGCTGCCAG TGATTCTGGA TATGTTCCTG GAAAACCTGC CCGTGCCCCC CGACCGTATC
GTGCCAATGA ATCGCATACG AGTCGCTACC GCCACCCACT TCTGGTATCC ATTCAGCGAT
TTACATGAGT TCACCATCAA AGATCCTAAA ACCTGCGTAT CGGTAGGGGC CGCTATTGCC
CTCTTATCTG AAATTGGGCA CCTGAGTGGA TTTCGGCTCG ATACGCGCCT ACTATCGGCG
CGCATGACCT CTACAGCCGA CTACATTGGC CTGTTGACGG ATGGACAACC TCCCCGGGTC
AAAAAAGATC ATCTGCTGGT CATACCTGAC ACGGATACCT CAACGGAACC ATTACATGAG
TTTGACCTGA CGGGCGTTGC CGACACATTT ATTGGCATGA GACAGATGGC AACTGAACGC
TGGATTGCAA CTCCCCTCTA TAAGATTGAG TTTGCCAGCG ACCGAGCCAA AGCGCTGTTA
ATGCCCAAGC TACCACTCAA ATTACGGGTT CGTCGGGCCA ATGCGCGCGA GAAGGAGAAA
CTGACGTTGG CAAATCTCCA GACCATACCT GATCCAAAAA CGGGTAAGGA TATTCCCGCT
CTACAATTAT CACTCTGTAC ATTGATTGAT CCGCACGGTC ATTGGCTCGA CACCGGGAAT
TTTCATTTAG ATCCATACAT CAATTAA
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| Protein sequence | MNTASLIANS GIQFIDIPLN LGDSSPAPRL RFEYVEQDDP EADRVYLVIP HQLENGRYVS
RLDLNVEAFM TDGTIDESKI LPETLQYLRE DHLITIQGRD ALNVLEGVWL PLPYFRTDHY
HANPRKLLPG PQSWARMYLG KIPTTERTEN SNYTHKLVLA FDTRCDDEDN PQINHTNYLI
PDSRDQQSGE RFVCATHEDA NGYFLSQKRE WLEEVLVKNQ KRVPRQLANE QHYLLHMGLY
MTLLKLLGQA GGFPVITMQD NALGRSLDIN LVLDVGNSRT CGLVLENTAR ERPAELALTD
ARRLKIRELW NPTQSNSQPF DMKLAFMETS FGKAEGLSDE YLFRWPSLVR VGPEATRYGI
IFGDNQPLNG VFEMTSSSPK RYLWDTHRRS KPWGYFSENA ELLQRSAASL PLAHRFTTDG
RLLTKANQQA LAEGKPPYAT MQEPLFSRSS LMTLALTEIL LQTLCYINSY EFRQERAEEG
VPRRLRRIVL TCPTAMPKTE RIKLRECAAD ALQALREYYG ENYKLIAPEL EIIPDYEQLA
EQDKDQEQVP QNLRELRENY NPQRLKTHWS YDEATCSQLV FLYNEIVHRF GSENAPLLFE
TMGRHRAGNA DGRKSLMVAS VDIGGGTTDL MIGHYEYEPG AVTSLFPNPI FWEGFNLAGD
QILKKLIEEC VLPQIAQEAR RLGAQRSGSV LYSLFGPYQH SDSEAKRTRK KLFAAQIATV
IAQGMLNQIT TYPDQVRQVA FDEFFEEHEA PIPAVIDYIN EGFRQVGAVG FDIRLMSWEV
SPTEINYKAI RNVIGTMLRD LCGIISQYGC DYVLLSGRPS TLPVILDMFL ENLPVPPDRI
VPMNRIRVAT ATHFWYPFSD LHEFTIKDPK TCVSVGAAIA LLSEIGHLSG FRLDTRLLSA
RMTSTADYIG LLTDGQPPRV KKDHLLVIPD TDTSTEPLHE FDLTGVADTF IGMRQMATER
WIATPLYKIE FASDRAKALL MPKLPLKLRV RRANAREKEK LTLANLQTIP DPKTGKDIPA
LQLSLCTLID PHGHWLDTGN FHLDPYIN
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