Gene Slin_6470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6470 
Symbol 
ID8730255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7842532 
End bp7843791 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content47% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003391226 
Protein GI284041296 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATTTC TACTCTTCTT TTGTCATGTC TTACTTTGTT TCGTCTGCCT GTCAGGTGGC 
CCATCTTATG GGCAGGCGAA GCTTCATTTG CTCGTGTTTG CCGATACCGA TGATCCCGAT
ATTGGTGATG CCAATCGGAA AACATACAAC TACCTGACAG GTCGATTCGG GCCTAATTCC
GCCCAATATG CTGGTTTAAC GCTGGTTACT GCTGGTTATT ATGGTAGTCG TTGTACAGTT
TCGGAGCTTG ATAAATACCT GAACGCGCTG ACGGTTGGCC CCGACGATGT AGTCATGTTT
TACTTTATTG GTCATGGGTG GAACAACCGA CAGAATGAAT ATCCATCCCT GATTTTTGGT
AAAGCCAGTG CTAGTCGTGC TACGCTCGAA GCCAACTCCC GTAATCTGCT CGATGTTTAT
GAGCGTATTA TGAGCAAAAA TCCTCGCCTG GCACTGATCA TAGGCGAAGC CTGTAATAAA
GAGCGTTCGG ATGACCCGCC CCTAACCAGC AATCTGGAAG CAATTCCGAT GAAACCGCCT
TCCGAAGATC CAGCTAAATT TCGTCAACTA CTTCGGGGAT ATGCCGGGAG CCTGGTGTTG
AGCAGTTGCC GGCGGAATCA GTTTTCGTAT AGCGATCCCA AAGGTGGCTG GCTTGGTTTA
GCTTGGCAAA ACTCCGTGAA TACGGTGCTG TCGGATAAGC AAAAAAAGAT GCCAGACTGG
CAGGAGTTTA TCAGTAGTGT GGTTCAGATA ACCGAGAGAA CGTCGGCCGT AAACAAACAG
CTACAACAAC CCCAGTATAT CTTGACGGTT CGGCCAGCAA AGAGTGGTGC GAATACGAAT
ACATCGAATA CTATTGCTGA ACGCCCCTGT CAGCCAATCA ATAGTTATGT GAACGAAACC
GCTCTGGCTG GTATTCGGGA GGACATGCCC TTATTGATAA AAATGAGTGA TGAGATAGAC
TCAGATAATG CGGTACAGTA CGCCCAAAAT TTCGAGCGAT TTTACATGAA CCAGCGGAGT
TTTTATGATG AGCTGGGGAA AATGCTCTTT TATAATGCTG TCGATATGCC TGATAAATGC
CGCCCGGCAT TTCAGGAAGA GACCAAATGG GTGAAGGCGA ACACAGATGA AATCACACGT
CGCTACAAAA TGGTGGTCAA GCAAGTCAAG AATCCTCAGC AATTAGTTGC TCAGGCCCGC
TCCGAACTAC CCTCCTTAAT TCAGCGCCTG GAAGATATTC TACATCGACT GAATAAATAG
 
Protein sequence
MRFLLFFCHV LLCFVCLSGG PSYGQAKLHL LVFADTDDPD IGDANRKTYN YLTGRFGPNS 
AQYAGLTLVT AGYYGSRCTV SELDKYLNAL TVGPDDVVMF YFIGHGWNNR QNEYPSLIFG
KASASRATLE ANSRNLLDVY ERIMSKNPRL ALIIGEACNK ERSDDPPLTS NLEAIPMKPP
SEDPAKFRQL LRGYAGSLVL SSCRRNQFSY SDPKGGWLGL AWQNSVNTVL SDKQKKMPDW
QEFISSVVQI TERTSAVNKQ LQQPQYILTV RPAKSGANTN TSNTIAERPC QPINSYVNET
ALAGIREDMP LLIKMSDEID SDNAVQYAQN FERFYMNQRS FYDELGKMLF YNAVDMPDKC
RPAFQEETKW VKANTDEITR RYKMVVKQVK NPQQLVAQAR SELPSLIQRL EDILHRLNK