Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6470 |
Symbol | |
ID | 8730255 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 7842532 |
End bp | 7843791 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003391226 |
Protein GI | 284041296 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGATTTC TACTCTTCTT TTGTCATGTC TTACTTTGTT TCGTCTGCCT GTCAGGTGGC CCATCTTATG GGCAGGCGAA GCTTCATTTG CTCGTGTTTG CCGATACCGA TGATCCCGAT ATTGGTGATG CCAATCGGAA AACATACAAC TACCTGACAG GTCGATTCGG GCCTAATTCC GCCCAATATG CTGGTTTAAC GCTGGTTACT GCTGGTTATT ATGGTAGTCG TTGTACAGTT TCGGAGCTTG ATAAATACCT GAACGCGCTG ACGGTTGGCC CCGACGATGT AGTCATGTTT TACTTTATTG GTCATGGGTG GAACAACCGA CAGAATGAAT ATCCATCCCT GATTTTTGGT AAAGCCAGTG CTAGTCGTGC TACGCTCGAA GCCAACTCCC GTAATCTGCT CGATGTTTAT GAGCGTATTA TGAGCAAAAA TCCTCGCCTG GCACTGATCA TAGGCGAAGC CTGTAATAAA GAGCGTTCGG ATGACCCGCC CCTAACCAGC AATCTGGAAG CAATTCCGAT GAAACCGCCT TCCGAAGATC CAGCTAAATT TCGTCAACTA CTTCGGGGAT ATGCCGGGAG CCTGGTGTTG AGCAGTTGCC GGCGGAATCA GTTTTCGTAT AGCGATCCCA AAGGTGGCTG GCTTGGTTTA GCTTGGCAAA ACTCCGTGAA TACGGTGCTG TCGGATAAGC AAAAAAAGAT GCCAGACTGG CAGGAGTTTA TCAGTAGTGT GGTTCAGATA ACCGAGAGAA CGTCGGCCGT AAACAAACAG CTACAACAAC CCCAGTATAT CTTGACGGTT CGGCCAGCAA AGAGTGGTGC GAATACGAAT ACATCGAATA CTATTGCTGA ACGCCCCTGT CAGCCAATCA ATAGTTATGT GAACGAAACC GCTCTGGCTG GTATTCGGGA GGACATGCCC TTATTGATAA AAATGAGTGA TGAGATAGAC TCAGATAATG CGGTACAGTA CGCCCAAAAT TTCGAGCGAT TTTACATGAA CCAGCGGAGT TTTTATGATG AGCTGGGGAA AATGCTCTTT TATAATGCTG TCGATATGCC TGATAAATGC CGCCCGGCAT TTCAGGAAGA GACCAAATGG GTGAAGGCGA ACACAGATGA AATCACACGT CGCTACAAAA TGGTGGTCAA GCAAGTCAAG AATCCTCAGC AATTAGTTGC TCAGGCCCGC TCCGAACTAC CCTCCTTAAT TCAGCGCCTG GAAGATATTC TACATCGACT GAATAAATAG
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Protein sequence | MRFLLFFCHV LLCFVCLSGG PSYGQAKLHL LVFADTDDPD IGDANRKTYN YLTGRFGPNS AQYAGLTLVT AGYYGSRCTV SELDKYLNAL TVGPDDVVMF YFIGHGWNNR QNEYPSLIFG KASASRATLE ANSRNLLDVY ERIMSKNPRL ALIIGEACNK ERSDDPPLTS NLEAIPMKPP SEDPAKFRQL LRGYAGSLVL SSCRRNQFSY SDPKGGWLGL AWQNSVNTVL SDKQKKMPDW QEFISSVVQI TERTSAVNKQ LQQPQYILTV RPAKSGANTN TSNTIAERPC QPINSYVNET ALAGIREDMP LLIKMSDEID SDNAVQYAQN FERFYMNQRS FYDELGKMLF YNAVDMPDKC RPAFQEETKW VKANTDEITR RYKMVVKQVK NPQQLVAQAR SELPSLIQRL EDILHRLNK
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