Gene Slin_6462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6462 
Symbol 
ID8730247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7833345 
End bp7834574 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content46% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003391218 
Protein GI284041288 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTTTA ATGCTCTGCT TCTCGCTTGG TTGCTCTGTT TTACGATTAA AGCTCACTCA 
CAACCTACAC TATATGGAAT CTTTGTCGGA GCCGTTGAGG ACCCCAAGCT TGCCGTTGCC
TGTCAGGTCG ATATTAAAAC AATGTTCGAT AGGTTTGGCT CCATTGCCCG TTCGATTGGC
TATAAATATA AAGTAGGCGT ATTGACCAAA GACAATTTCT CGAATGAAAG CATCAAATCC
GTTCTGGATA GTATTACCTG CGGACCCGAC GATATTATCG TTTTTTACTA CACAGGTCAT
GGGTATAATC GGGCCGGTAC CAGCGACGAA TTTCCGGTGC TGCATGTGGA TACACTACAG
GTAAAAACAA ATTTTCCGCT GTCGGGAATT CACCAGACCC TACTGAGTAA GAAGGCCCGA
TTCTGTCTGT CCATTGGTGA TTGCTGTAAT GCGCTGGCAA ACGAAACGCC ACCTCAGGAA
CGCAGTTTAG TAAAAGGAAC CAATTGCAAT CCGGAGATTT TCGAGCAATT ATTTCTGAAA
TCTCGTGGGG GGGTTATGAT TGCCAGTAGT AAGCGGGGGC AGTTTTCAGG GGCATCGTTT
ACCAATAGCT GGTACACCTG GGCTTTTCAG GAATCGTTAG AGTATGCCTG CCACTACAAT
AATCAAATTA CCTGGCAACA ACTTCTGGAT GACTCTCAAA ACCGGATGTG GAGTATTACC
GCTGCACGAG TTCATAAGCA GGAGTCTGTT TACAAACTGA ATTTACTGGA TCAGTCAACC
AGCCCGACTC CGGTGGCTGC TGTTCAGGCA GATACCGTTC CGAATAATGC CCCAGTTGCT
TCAACGCCGG TAGTTTCTGG AAATGCTGCG CCACCTGTAG AGGTGGTCAA TTCAACAACT
ATGCTGACAG TCTCAACTGC TGGCCAACGG CCTGACTACA GTCTGGTGAA CAAGTACCTG
ACTGGCCTTG CCAATCCATT GATCAGTTAT CAAACCCGCA AGGCTATGCA GCTACAGGCT
GGTCGGTTTT TTATTCACAA TGCCAAAGTA AATCTGTATG TCAACGATAC GAGGGTCGAT
GTTCTGCCGC TTCAACAACT GATGAACCGC TATGCTGTAT CGACAGACAA GCACTCTGTC
CGACAGGTGA ATTTAGTAGA ACGTTTGTCG AAACTTGATC CTTCAGGTCG ATTCTACACG
GAAATAGCCT TACAGGAAAT CTGGGAATAA
 
Protein sequence
MRFNALLLAW LLCFTIKAHS QPTLYGIFVG AVEDPKLAVA CQVDIKTMFD RFGSIARSIG 
YKYKVGVLTK DNFSNESIKS VLDSITCGPD DIIVFYYTGH GYNRAGTSDE FPVLHVDTLQ
VKTNFPLSGI HQTLLSKKAR FCLSIGDCCN ALANETPPQE RSLVKGTNCN PEIFEQLFLK
SRGGVMIASS KRGQFSGASF TNSWYTWAFQ ESLEYACHYN NQITWQQLLD DSQNRMWSIT
AARVHKQESV YKLNLLDQST SPTPVAAVQA DTVPNNAPVA STPVVSGNAA PPVEVVNSTT
MLTVSTAGQR PDYSLVNKYL TGLANPLISY QTRKAMQLQA GRFFIHNAKV NLYVNDTRVD
VLPLQQLMNR YAVSTDKHSV RQVNLVERLS KLDPSGRFYT EIALQEIWE