Gene Slin_6454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6454 
Symbol 
ID8730239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7825662 
End bp7826357 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content50% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003391210 
Protein GI284041280 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGACCG GCTTCGTTTT GCTGTTGCTT GGTTTTGTTC CGGGCAGCAC ACAGGCACAG 
ACAAGCTACA AATACATACG AAAACACCTT GAGCGGTACG ACGACAAGAC CATTCATTAC
GGTTTTTTCT TTGCCGCCCC GATTACCCGA TTCAGCGTTA CACACAGCCC ACAATTTCTG
ACGGCGGATT CGGCCTATCG TATCTATTCG CCGAATAAAC CAGCATTTCG TGTTGGGTTT
GTTGTCAATG CCTATTTAAA CGACCGCTTC GATCTACGGC TTACACCCTC AGTATCCCTG
TTTAGCCGGG AGGTTCAGTA CGATTATCCG GGCGGCACAT CAAAGACGGA AATCCGGGAG
TCAACCTGGA TCGATTTCCC GCTGTTGCTC AAATACAAAT CTGAACGGCG CAACAACAGC
CGGATGTATC TGCTGGCGGG CGGCACATTC AGCGTTGAGA GTAACGTGCG CCGAAAAGAG
ACACAAGGGG CAAGCCGACT AAGTACTGGC ACGATGGATT TTGCGGTTGA ATATGGTTTG
GGCTTCGAGC AGTTTTTCGA GTATTTTAAG TTTGCGCCCG AAATCCGGTT CTCCCACGGA
CTCGTTAACC TTTACCGTCC CGGCACCAAT GCCGCTAGTA TAGGCATCAA CAAATTAACT
ACGCACTCGG TAACGCTTTA TCTAAATTTC GAGTAG
 
Protein sequence
MQTGFVLLLL GFVPGSTQAQ TSYKYIRKHL ERYDDKTIHY GFFFAAPITR FSVTHSPQFL 
TADSAYRIYS PNKPAFRVGF VVNAYLNDRF DLRLTPSVSL FSREVQYDYP GGTSKTEIRE
STWIDFPLLL KYKSERRNNS RMYLLAGGTF SVESNVRRKE TQGASRLSTG TMDFAVEYGL
GFEQFFEYFK FAPEIRFSHG LVNLYRPGTN AASIGINKLT THSVTLYLNF E