Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6309 |
Symbol | |
ID | 8730093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 7659685 |
End bp | 7660473 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | |
Product | sugar transferase |
Protein accession | YP_003391067 |
Protein GI | 284041137 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.498219 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAAACT CAACCGTTTC TTCAGGAAAA ATCAATAAAG AATGTGAACT AGACACAATC GACGTAACAC CAAACTTTAG CCCAAGAAAC ATGGAAAACG TTCTTTCTAA ATTTTACCTC TCAACCAAAC CAACAAGCAA TCTCTATCTA CAGTGGATAG AGGACGAAAG CTTCGTGGTT GATGAATCCA ACTCGTTCTA TTTGCTCGTA GGTAAACGTC TTGTTGATAT ATTAATTTCC GCAGCTGCCA TCGTCTTTGT TTTAAGCTGG CTGTTACCAA TTATCGGCAT TATTATTTTT ATTGATTCAC CAGGATCAAT ATTCTTCATA CAGCCCAGAA CCGGTTATAA AGGTGCTTGC TTTCCGTGTA TAAAGTTTCG GACGATGTAC AACATCAAGC AGACCGAATT CCGTCAGACC AGCTTTAACG ACAACCGGGT AACACGGGTT GGCCGGTTCC TTCGGAAAAC TAATCTGGAT GAATTGCCTC AGTTTATCAA TGTTTTATTG GGTAGCATGA GTATTGTGGG CCCTCGTCCA CATGCGGTAC AACATGACGT GCTTTACTGG ACATCCATGA CGTACAGAAA CCGGTATCGG ATTAAGCCGG GTATTACAGG CCTTGCTCAG GTACGCGGAG CACGCGGTGA AACCGAGAAA TCTCAGAAAA TGGATCATCG GGTTCGCTAC GACCTTTTTT ATATCAAACA GAGAAGTTTT CTGTTCGATA TGAAGATCTT TTTCCTCACC ATTAAAACGA TGCTTGAAGG TGATAAAAAT GCCTGGTAA
|
Protein sequence | MTNSTVSSGK INKECELDTI DVTPNFSPRN MENVLSKFYL STKPTSNLYL QWIEDESFVV DESNSFYLLV GKRLVDILIS AAAIVFVLSW LLPIIGIIIF IDSPGSIFFI QPRTGYKGAC FPCIKFRTMY NIKQTEFRQT SFNDNRVTRV GRFLRKTNLD ELPQFINVLL GSMSIVGPRP HAVQHDVLYW TSMTYRNRYR IKPGITGLAQ VRGARGETEK SQKMDHRVRY DLFYIKQRSF LFDMKIFFLT IKTMLEGDKN AW
|
| |