Gene Slin_6309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6309 
Symbol 
ID8730093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7659685 
End bp7660473 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content42% 
IMG OID 
Productsugar transferase 
Protein accessionYP_003391067 
Protein GI284041137 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.498219 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAACT CAACCGTTTC TTCAGGAAAA ATCAATAAAG AATGTGAACT AGACACAATC 
GACGTAACAC CAAACTTTAG CCCAAGAAAC ATGGAAAACG TTCTTTCTAA ATTTTACCTC
TCAACCAAAC CAACAAGCAA TCTCTATCTA CAGTGGATAG AGGACGAAAG CTTCGTGGTT
GATGAATCCA ACTCGTTCTA TTTGCTCGTA GGTAAACGTC TTGTTGATAT ATTAATTTCC
GCAGCTGCCA TCGTCTTTGT TTTAAGCTGG CTGTTACCAA TTATCGGCAT TATTATTTTT
ATTGATTCAC CAGGATCAAT ATTCTTCATA CAGCCCAGAA CCGGTTATAA AGGTGCTTGC
TTTCCGTGTA TAAAGTTTCG GACGATGTAC AACATCAAGC AGACCGAATT CCGTCAGACC
AGCTTTAACG ACAACCGGGT AACACGGGTT GGCCGGTTCC TTCGGAAAAC TAATCTGGAT
GAATTGCCTC AGTTTATCAA TGTTTTATTG GGTAGCATGA GTATTGTGGG CCCTCGTCCA
CATGCGGTAC AACATGACGT GCTTTACTGG ACATCCATGA CGTACAGAAA CCGGTATCGG
ATTAAGCCGG GTATTACAGG CCTTGCTCAG GTACGCGGAG CACGCGGTGA AACCGAGAAA
TCTCAGAAAA TGGATCATCG GGTTCGCTAC GACCTTTTTT ATATCAAACA GAGAAGTTTT
CTGTTCGATA TGAAGATCTT TTTCCTCACC ATTAAAACGA TGCTTGAAGG TGATAAAAAT
GCCTGGTAA
 
Protein sequence
MTNSTVSSGK INKECELDTI DVTPNFSPRN MENVLSKFYL STKPTSNLYL QWIEDESFVV 
DESNSFYLLV GKRLVDILIS AAAIVFVLSW LLPIIGIIIF IDSPGSIFFI QPRTGYKGAC
FPCIKFRTMY NIKQTEFRQT SFNDNRVTRV GRFLRKTNLD ELPQFINVLL GSMSIVGPRP
HAVQHDVLYW TSMTYRNRYR IKPGITGLAQ VRGARGETEK SQKMDHRVRY DLFYIKQRSF
LFDMKIFFLT IKTMLEGDKN AW