Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6245 |
Symbol | |
ID | 8730028 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 7575308 |
End bp | 7576270 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | Phytanoyl-CoA dioxygenase |
Protein accession | YP_003391003 |
Protein GI | 284041073 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.154868 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAATA TTTCTGTTGC CCAGCGGATG AATCTGCCCT GGGTCGAATC GCCGTTCTTT AACGATCTCC TTCAAAAGCA CAATCTCACG CCCGAGCAAC GTGAGCTGGC GACTCACTAC AACCGGGAAG GCTTTATCGT ATTGCCCCAG CAGGTGAGTC ATGAACTGAT AGACCGGGCC ATCGAGGAAA TTAAAGGTGA ATATCCCGAT AAGGTTGGTG AAGAACCTTC CCGACACCAG GATATCTGGA AGAGATACGG CACGGTTCGC GAGCTGGCCT CCCAGCCTGC CATCTTCGAT GTACTGCGCA TGCTATATGA CCGGGAGCCT ATTCCGTTTC AGACGCTCAA TTTCAAGTTT GGCACCCAGC AGCGGGCTCA CTCCGACAGC ATTCACTTCA GCTGTACCCC GGCCCGTTTT ATGTGCGGTG TCTGGGTTGC ACTGGAAGAA ACATCGGCCA CTAACGGCCC CTTGTTTTAT TATCCACGCT CGCACCGGCA GGAAGAGTTC AACTATTTCG ATTTAGGCAT AGAAGCACGG GGTAATTACG AGGAGTACCC CAACTATGAG GATTTCGTGG AAGAGTTTAT GGCCGCCAAA GGGTACGAGC GGAAGGAAAT TCACATGAAA AAAGGCGATG TTCTGATCTG GTCGTCGAAC TTGATCCACG GTGGCATGCC CATTACCGGG GGTAACGTAA CCCGATGGTC GCAGGTGACG CACTACTATT TTGAGGGTTG CATGTATTAC TCGCCCCGTT TTTCAGACAT GTTTTCCAAA AACCTGAACC TGCGGCACGT GATCAATATT GCCACCGGAA AAGTGGTTCA GCACAGTGAA AATGGCAAAC CCATCGAAAC GATCAACACG GGCAATTTCC GCTACGCCGT AAGTCATAAC TTCACCCTGC CCGTACTGGT CAAAGAGCTG GTAAAAAAGC TGATCGGTAA AAAGCCGTTT TAA
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Protein sequence | MKNISVAQRM NLPWVESPFF NDLLQKHNLT PEQRELATHY NREGFIVLPQ QVSHELIDRA IEEIKGEYPD KVGEEPSRHQ DIWKRYGTVR ELASQPAIFD VLRMLYDREP IPFQTLNFKF GTQQRAHSDS IHFSCTPARF MCGVWVALEE TSATNGPLFY YPRSHRQEEF NYFDLGIEAR GNYEEYPNYE DFVEEFMAAK GYERKEIHMK KGDVLIWSSN LIHGGMPITG GNVTRWSQVT HYYFEGCMYY SPRFSDMFSK NLNLRHVINI ATGKVVQHSE NGKPIETINT GNFRYAVSHN FTLPVLVKEL VKKLIGKKPF
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