Gene Slin_6227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6227 
Symbol 
ID8730010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7548477 
End bp7549739 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content55% 
IMG OID 
Productprotein of unknown function DUF218 
Protein accessionYP_003390985 
Protein GI284041055 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAT ACTTATCTAT TTTACTACTC CTGTCGGCTC CGTCATTACT GGCTCAGTCT 
CTAGGGGGCT TTCAGCCGGG GTATAAATTG CTGAGTTCGG GCAATCGGGT GGCGGATAAG
AATTATTATC TGCTCACCGT TATCCGGCAA ACACCCGCCG TTTGGCAGCT GCTTCAACAG
GAACCGGGGC TGCAAACGAT AGGCAGGCAG CGAGCCGAAC TGATCAAAGC CCACGCGCAG
GACACCTGCC GAACACCGGT GTCGCTGGTC GGTGGTTTTC GCTGGTCACC GGCTGATTCG
CTGCAGATAC TGACCGTCAT TCAATCGCTG TATTCGCGGA ACAAACCCGT CTTCGATAAG
CTCATCAATG AACAATTGCG CCCATCGGGC TGCTACCAGC GGTTTGTTAA TCTGCCGAAC
GGCGAGTTTC TGGCGCGGGC CTGGGGCCAG TATGTGCTGG GCATCAACTA CACCATCGAC
CAGTTCGGCC TTGGGAAGAA GATGCGCTAT CCCCGCATCG ACTCGGCCAA CTACCCCGTC
AATGGTCGCT ATTACCGAAC GGTTCTGAAA GATATGTTTG CGTATCTGGC CGAACAAGCC
GACACGATGG CGGTCTTTTA CCAACCTTCG CTGGCGGTTG CCATGCAGTT AATGGACGTC
AACGACCGCG ACGAGCCCGC CCGGCATGAA CCTATGGAGC GACGGGACAA CCAGAAAGCG
TTTGTCCAGG TGAAGTCGAC ACCCTGGACG AAGTACACCT ACGCAGCCAT CGTTGTACCC
GGCAATGGCC CTGAACTGGC GACGACGCCC CTCAGCCCCC TGAATAAAAT GCGGCTGGAT
ATGGTAGTCA GCCGTTACCG AAAACGCTGG GCACCGTTCA TTATCCTGAG TGGAGGCTAC
TGTTATCCGT TCCGGGGACC ATACGGCGAA GCGATCGAGA TGAAGAACTA CCTGATGCAG
AAACACGGCA TTCCGGAATC CGCCATCCTC ATCGACCCGC ACGCCAGGCA TACGACGACA
AACTTCCGCA ATGCCAACCG GCTCATGATT CGCTACGGCT TTCCTACGGA TAAAGTTTGT
GTGTTCATTT CGACCCAAAG CCAGACGAAC TCCGTCGCCA GTGCGGCATT CGACGACCGG
AATCGGCGCG AACTGAGCTA CTTACCCTAC CGCGACAAGA AACGCATTTC GCCCCATGAC
ATCGAGTTTT ACCCAACCCT GGAAAGCCTG CACATGGACC CCTATGACCC ACTAGACCCG
TAG
 
Protein sequence
MKKYLSILLL LSAPSLLAQS LGGFQPGYKL LSSGNRVADK NYYLLTVIRQ TPAVWQLLQQ 
EPGLQTIGRQ RAELIKAHAQ DTCRTPVSLV GGFRWSPADS LQILTVIQSL YSRNKPVFDK
LINEQLRPSG CYQRFVNLPN GEFLARAWGQ YVLGINYTID QFGLGKKMRY PRIDSANYPV
NGRYYRTVLK DMFAYLAEQA DTMAVFYQPS LAVAMQLMDV NDRDEPARHE PMERRDNQKA
FVQVKSTPWT KYTYAAIVVP GNGPELATTP LSPLNKMRLD MVVSRYRKRW APFIILSGGY
CYPFRGPYGE AIEMKNYLMQ KHGIPESAIL IDPHARHTTT NFRNANRLMI RYGFPTDKVC
VFISTQSQTN SVASAAFDDR NRRELSYLPY RDKKRISPHD IEFYPTLESL HMDPYDPLDP