Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6227 |
Symbol | |
ID | 8730010 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 7548477 |
End bp | 7549739 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | protein of unknown function DUF218 |
Protein accession | YP_003390985 |
Protein GI | 284041055 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAAAT ACTTATCTAT TTTACTACTC CTGTCGGCTC CGTCATTACT GGCTCAGTCT CTAGGGGGCT TTCAGCCGGG GTATAAATTG CTGAGTTCGG GCAATCGGGT GGCGGATAAG AATTATTATC TGCTCACCGT TATCCGGCAA ACACCCGCCG TTTGGCAGCT GCTTCAACAG GAACCGGGGC TGCAAACGAT AGGCAGGCAG CGAGCCGAAC TGATCAAAGC CCACGCGCAG GACACCTGCC GAACACCGGT GTCGCTGGTC GGTGGTTTTC GCTGGTCACC GGCTGATTCG CTGCAGATAC TGACCGTCAT TCAATCGCTG TATTCGCGGA ACAAACCCGT CTTCGATAAG CTCATCAATG AACAATTGCG CCCATCGGGC TGCTACCAGC GGTTTGTTAA TCTGCCGAAC GGCGAGTTTC TGGCGCGGGC CTGGGGCCAG TATGTGCTGG GCATCAACTA CACCATCGAC CAGTTCGGCC TTGGGAAGAA GATGCGCTAT CCCCGCATCG ACTCGGCCAA CTACCCCGTC AATGGTCGCT ATTACCGAAC GGTTCTGAAA GATATGTTTG CGTATCTGGC CGAACAAGCC GACACGATGG CGGTCTTTTA CCAACCTTCG CTGGCGGTTG CCATGCAGTT AATGGACGTC AACGACCGCG ACGAGCCCGC CCGGCATGAA CCTATGGAGC GACGGGACAA CCAGAAAGCG TTTGTCCAGG TGAAGTCGAC ACCCTGGACG AAGTACACCT ACGCAGCCAT CGTTGTACCC GGCAATGGCC CTGAACTGGC GACGACGCCC CTCAGCCCCC TGAATAAAAT GCGGCTGGAT ATGGTAGTCA GCCGTTACCG AAAACGCTGG GCACCGTTCA TTATCCTGAG TGGAGGCTAC TGTTATCCGT TCCGGGGACC ATACGGCGAA GCGATCGAGA TGAAGAACTA CCTGATGCAG AAACACGGCA TTCCGGAATC CGCCATCCTC ATCGACCCGC ACGCCAGGCA TACGACGACA AACTTCCGCA ATGCCAACCG GCTCATGATT CGCTACGGCT TTCCTACGGA TAAAGTTTGT GTGTTCATTT CGACCCAAAG CCAGACGAAC TCCGTCGCCA GTGCGGCATT CGACGACCGG AATCGGCGCG AACTGAGCTA CTTACCCTAC CGCGACAAGA AACGCATTTC GCCCCATGAC ATCGAGTTTT ACCCAACCCT GGAAAGCCTG CACATGGACC CCTATGACCC ACTAGACCCG TAG
|
Protein sequence | MKKYLSILLL LSAPSLLAQS LGGFQPGYKL LSSGNRVADK NYYLLTVIRQ TPAVWQLLQQ EPGLQTIGRQ RAELIKAHAQ DTCRTPVSLV GGFRWSPADS LQILTVIQSL YSRNKPVFDK LINEQLRPSG CYQRFVNLPN GEFLARAWGQ YVLGINYTID QFGLGKKMRY PRIDSANYPV NGRYYRTVLK DMFAYLAEQA DTMAVFYQPS LAVAMQLMDV NDRDEPARHE PMERRDNQKA FVQVKSTPWT KYTYAAIVVP GNGPELATTP LSPLNKMRLD MVVSRYRKRW APFIILSGGY CYPFRGPYGE AIEMKNYLMQ KHGIPESAIL IDPHARHTTT NFRNANRLMI RYGFPTDKVC VFISTQSQTN SVASAAFDDR NRRELSYLPY RDKKRISPHD IEFYPTLESL HMDPYDPLDP
|
| |