Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6163 |
Symbol | |
ID | 8729946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 7469222 |
End bp | 7470763 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | |
Product | Integrase catalytic region |
Protein accession | YP_003390922 |
Protein GI | 284040992 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAACC AGCGTCTTCC TATGCACCTA CTCCGTCAGA TTCTGCTTCT CCAGCAGCAA CATAAGTCTA TCCGGGATAT TGCCCGTTCG CTAGGCCTGG CTCGCAATAC CGTCCGGGGC TACCTGCGCA TGCTTCCCGA TCCGGCAACG CTTTCCCTCC CGCAACTCTC CGACCAACAG TTGGATGAGC TGGTACAAAG TCGTCCGCCT GCGCCCTCAC CCGACGCCCC CCTAACTATT CTTCAACAAC GATTCGCTCA GATTGACCGC GAACTGACCC GACCCGGCGT TACCCGGTAT AGTCTTTGGC TGGATTACAA AGCCGAACAT CCCAACGGCT ATCAGTATAC GCAGTTCTGC CACTATTATC AGCTTTGGAG CCAGCGGCAG CAGACCAGCA TGCACATTGA GCACAAAGCG GGCGACAAAC TCTTCGTCGA CTTTGCGGGC AAGCGGCTCT CGCTGGTCGA CCAGACAACA GGGGAGGTTA GGCCGGTCGA GTTCTTCGTG GCCGTGCTGG GTTGCAGTCA GCTCACTTAC GCCCAGGTAG TGGCTACTCA GCGCAAGGAG GACTTCATCA CCGCCCTGCA AAACGCCCTG CATTACTTCG GGGGCGTACC AGCGGCCATC GTGCCCGATA ACCTCAAAGC GGCTGTGATT CGCTCGGATC GCTATGAACC CCAGATCAAT GAGACGCTGG CTGACTTTGC GCTCCATTAT CAAACGACGA TCCTGCCGGC CCGGAGCGGT AAGCCCCGCG ACAAAGCTCT GGTCGAAGGA GCCGTCAACA TCCTCTATCG ACGCATCTAC GCTCCCCTGC GCAATGAGGT CTTTCATCGA CTTGACGATC TCAATGCGGC TATCCGCCCC TTACTCGACG CCCACAACCA AATGCGCTTT CAGAACCGGG GCCATAGTCG GCAGTCGCAG TTCGAGGAGC GGGAGCGAAT GCACTTGATG GGGTTGCCCA ACACGGCTTA TCTCATCAAA CACTATGCGG GGAGCCGGGT TCAGAAAAAC GGCCATGTAC TGCTGTCAGA AGACAAGCAT TATTACAGCG TACCCTATCG CTACATCGGC CAGTGGGTAC GGCTGATCTA CACGGCGTCA AGCGTTGAAG TCTACTGCCA GCACCAGCGT ATTGCGACTC ACCAGCGATT ACAGGGACAG TACCATTACT CGACACTCAA AGAGCATTTG CCCCCAGCCC ATCAGTGGAT CAGTGACTGG AGCCCGGAGA CGTTCGTCCG TCGGGCCGAC CGCATTGGCC CCCAAACCCG GCAGGCCGTC GAAGCCATCC TAACGAGCCG GGCGCATCCC GAACAGGCTT ATAAGTCGTG CCAGGGTGTA CTAAGTCTGG AAAAGAAAGT GGGTAGAGAA CGTCTGGAGC GGGCCTGCCA ACGGGCGTTG TGCTACCAGA GCGTGAGCTA CAAAGTCATC CGATCCATCA TCGAACGCGG GCTGGATACG CTCTCCGATG CCAGTCCTGT CAGCTCAGTA CCCAGCCATG AAAACATCCG GGGCGCATCA GCCTACCAGT AA
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Protein sequence | MANQRLPMHL LRQILLLQQQ HKSIRDIARS LGLARNTVRG YLRMLPDPAT LSLPQLSDQQ LDELVQSRPP APSPDAPLTI LQQRFAQIDR ELTRPGVTRY SLWLDYKAEH PNGYQYTQFC HYYQLWSQRQ QTSMHIEHKA GDKLFVDFAG KRLSLVDQTT GEVRPVEFFV AVLGCSQLTY AQVVATQRKE DFITALQNAL HYFGGVPAAI VPDNLKAAVI RSDRYEPQIN ETLADFALHY QTTILPARSG KPRDKALVEG AVNILYRRIY APLRNEVFHR LDDLNAAIRP LLDAHNQMRF QNRGHSRQSQ FEERERMHLM GLPNTAYLIK HYAGSRVQKN GHVLLSEDKH YYSVPYRYIG QWVRLIYTAS SVEVYCQHQR IATHQRLQGQ YHYSTLKEHL PPAHQWISDW SPETFVRRAD RIGPQTRQAV EAILTSRAHP EQAYKSCQGV LSLEKKVGRE RLERACQRAL CYQSVSYKVI RSIIERGLDT LSDASPVSSV PSHENIRGAS AYQ
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