Gene Slin_5998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5998 
Symbol 
ID8729779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7274090 
End bp7275055 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content55% 
IMG OID 
Productoxidoreductase domain protein 
Protein accessionYP_003390759 
Protein GI284040829 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.578764 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCGCT GGGGAATTTT AGGACCGGGC CGTATTGCCC ATAAATTCGC ACAGGACCTG 
CTTACGCTGC CCGATGCTCA ACTGTATGCC GTTGCTTCCA CTAACCTGCA ACGCGCCGAA
GAGTTTGCCA ATCAATACAA TGCCCCCCAT GCGCTGGGTT CGTACGAAGA ACTTTTATCA
CTCCCCGATC TGGATGTGGT TTACGTGGCG ACCCCCCACA TCAAGCACCA CGAAAATGCA
TTGATGTTGC TTAAGGGAGG GATACCCGTG CTGGGCGAAA AACCATTTGC CATGAATGGT
GAGGAGGTTC GCGAAATGGT CGAACTGGCC CGGGCAAAGG GTATATTCCT GATGGAGGCC
CTCTGGAGCC GGTTTATGCC GGGCGTGGTC AAAGCGCTGG AGTTGGTTCA GGCGGGGGCC
ATTGGCAAGG TGGTTTCCGT AAAAGCTGAT TTTGGTTTCA GAGCGCCTTT CTCGCCCGAA
GGCCGCCTGT TCGACAAAGC GCTGGGTGGT GGTTCGCTGC TCGACATTGG TATTTATCCG
CTGTTCTTTT CCTACCTGAT GCTCGGCAAG CCCGAAACCA TCAAAGCCTC CGCCATTTTT
GGCTCGACGG GGGTCGATGA GCAATGCGGT ATGGTGCTCA CCTACGCCGA TGGGCAAATT
GCTTTACTGG ACAGTACCTT ACAGGCAAAA ACGGATTGTA TCGGTCTGAT TCAGGGCGAA
ACGGGTCAAA TTCGTGTACA CGGCCGTTTT CACGAAACGA TGGCTGTTTC GCTGGAACCA
GCCGAAGGGG AACCTACCGT ATTTGACTTT GCCCGCACCA CCCACGGGTA TGATTACGAA
GCGGCCCACG TAATGCAGTG CCTGGCCGAG GGAAAAACCG AAAGCCCGCT CTGGTCGCTC
GACGATAGCC TGAACCTGAT GGCACTGCTC GACGCCGTTC GGGCCGAAGC GGGAATTGTT
TACTAA
 
Protein sequence
MTRWGILGPG RIAHKFAQDL LTLPDAQLYA VASTNLQRAE EFANQYNAPH ALGSYEELLS 
LPDLDVVYVA TPHIKHHENA LMLLKGGIPV LGEKPFAMNG EEVREMVELA RAKGIFLMEA
LWSRFMPGVV KALELVQAGA IGKVVSVKAD FGFRAPFSPE GRLFDKALGG GSLLDIGIYP
LFFSYLMLGK PETIKASAIF GSTGVDEQCG MVLTYADGQI ALLDSTLQAK TDCIGLIQGE
TGQIRVHGRF HETMAVSLEP AEGEPTVFDF ARTTHGYDYE AAHVMQCLAE GKTESPLWSL
DDSLNLMALL DAVRAEAGIV Y