Gene Slin_5944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5944 
Symbol 
ID8729725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7202718 
End bp7204646 
Gene Length1929 bp 
Protein Length642 aa 
Translation table11 
GC content51% 
IMG OID 
Productproton-translocating NADH-quinone oxidoreductase, chain L 
Protein accessionYP_003390705 
Protein GI284040775 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAG AATTACTCTG TGCGTTAATT CCGCTCTTCC CGCTTATTGG CTTTCTGATT 
AACGGGTTGG GCTTTCGTCG GGTGCCTAAG GGTTTAGCCG GGGCCATATC AACCGTTGCC
GTTCTGGCAT CTTTCCTGAC TTCCGCCTAT TTATTCGGGG CATTTCTGGG AAACGCCAAT
CTGTCTGCTA ATGCCGGCCC GCAGATCGCT ACCCTTTTCG ACTGGATCAG CGTGGGCGAT
TTACACATCA ACTTCTCGTT CCAGATTGAT CAGTTGTCGT TACTGATGTT GCTGGTGGTA
ACGGGTGTTG GCTCCCTGAT TCACCTGTAT AGCATTGGCT ACATGAGCCA CGACGAAGGG
TTTGGCAAGT TCATGGCTTT CCTAAACCTG TTCATTTTCT TTATGTTGCT GCTGGTGATG
GGGTCAAACT ACGTCATCAT GTTTATTGGC TGGGAAGGTG TAGGACTTTG TTCTTACCTG
CTGATCGGCT TCTGGAACAA AAACATCAGC TACAACAATG CTGCCCGAAA AGCCTTCGTC
ATGAACCGAA TCGGCGATTT GGGCTTTTTG TTGGGCATAT TCATGCTTAT CAACACGTTT
GGTACGGTTG AATACGTCGA CATTTTCAAG CAGGCAACCA GTCTGGCCGT TGGCGACAAA
ACGATTCTGG CTATTACACT GCTACTTTTT GTGGGTGCCA TGGGTAAATC GGCGCAGGTT
CCGCTCTATA CCTGGCTTCC CGATGCCATG GCTGGTCCAA CGCCCGTATC GGCCCTGATT
CACGCAGCAA CTATGGTAAC GGCTGGCATT TATATGGTTG TTCGCTCGAA CGTATTATAT
ACGCTGGCTC CGCTAACGCT CGAAATCATT GGTGGTATTG CCATCGTTAC CGCGTTGCTG
GCAGCTTCCA TCGGCCTGCT GCAAAATGAT ATCAAGAAAG TACTGGCTTA CTCGACTGTT
TCGCAGTTGG GCTATATGTT CCTGGGTTTG AGTGCCACGG CGTATACAGC GGGCATGTTC
CACGTTATTA CCCACGCCTT CTTCAAAGCG TTGTTGTTCC TCGGAGCCGG TAGCGTAATC
CACGCCATGT CCGACGAGCA GGATATTCGT AAAATGGGTG GTTTGCGCAA AGCTTTGCCC
GTTACGTTCA TTACGTTCCT GATTGGTACC ATTGCCATTT CGGGCCTTCC TCCTTTTGCC
GGTTTCTTCT CGAAAGACGA AATCCTGGCG CATGTATTCG AACACAATAA ATTGCTGTGG
GGACTGGGTG TGCTGGGTTC CGGTCTGACC TCTTTCTACA TGTTCCGGTT GCTGTTCCTG
ACTTTCTTTG GCGAGTTCCG CGGAACGGAA GAGCAGCGGC ATCACCTGCA CGAGTCACCG
GCTACCATGA CCGCACCCCT GGTCGTGCTG GCGATTCTGT CAATTATTGG CGGTGGCCTG
AACTTACCCG GCGGTGGCTG GCTGAGCGGC TTCATGGCAC CTATTTTCGA AGGGTCGAAG
CAGGTAAGCC CCGAAGCTTT CGCCGAATCG ACCATCGAGC ATAGCACTGA GTACATATTG
ATGGCTGTTT CGGCCGGGGT AGCTTTACTG GCACTTATTA TCGCTTATGT CATGTACATC
AGCCGTCAGG CCGTACCAGC ACCCGAATCG GCTGAGCGGT CGCTGCCCGA GCAGGTTATC
TACAACAAAT ACTACGTTGA TGAACTGTAC GAAACGATCA TTGTGCGACC AATTCGTGGG
CTCGGCGATG CCTTTTATAG TTTCGGCGAA GGACTTGTCG ATGGCGTTGT CAATGGCGTA
GCCTGGGTTG TTCAAAAGAT TTCGGCCCAG TTGCGACTGC TGCAAAGTGG TTCTATCGGC
TTTTATGTAT TGGCAATGGT CGTGAGTATT GTCGTCATTT TTGCCCTTCG GTTCTTCATT
CGTTTATAA
 
Protein sequence
MKIELLCALI PLFPLIGFLI NGLGFRRVPK GLAGAISTVA VLASFLTSAY LFGAFLGNAN 
LSANAGPQIA TLFDWISVGD LHINFSFQID QLSLLMLLVV TGVGSLIHLY SIGYMSHDEG
FGKFMAFLNL FIFFMLLLVM GSNYVIMFIG WEGVGLCSYL LIGFWNKNIS YNNAARKAFV
MNRIGDLGFL LGIFMLINTF GTVEYVDIFK QATSLAVGDK TILAITLLLF VGAMGKSAQV
PLYTWLPDAM AGPTPVSALI HAATMVTAGI YMVVRSNVLY TLAPLTLEII GGIAIVTALL
AASIGLLQND IKKVLAYSTV SQLGYMFLGL SATAYTAGMF HVITHAFFKA LLFLGAGSVI
HAMSDEQDIR KMGGLRKALP VTFITFLIGT IAISGLPPFA GFFSKDEILA HVFEHNKLLW
GLGVLGSGLT SFYMFRLLFL TFFGEFRGTE EQRHHLHESP ATMTAPLVVL AILSIIGGGL
NLPGGGWLSG FMAPIFEGSK QVSPEAFAES TIEHSTEYIL MAVSAGVALL ALIIAYVMYI
SRQAVPAPES AERSLPEQVI YNKYYVDELY ETIIVRPIRG LGDAFYSFGE GLVDGVVNGV
AWVVQKISAQ LRLLQSGSIG FYVLAMVVSI VVIFALRFFI RL