| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5902 |
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| Symbol | |
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| ID | 8729683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 7153119 |
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| End bp | 7154531 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | 3-isopropylmalate dehydratase, large subunit |
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| Protein accession | YP_003390664 |
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| Protein GI | 284040734 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.367331 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTACCC CAAAAACCCT GTTCGATAAA GTCTGGGATG CACACGTCAT CCGGCAGGTT
AAGGATGGTC CCGATGTGTT GTTCATCGAC CGCCATTTTA TCCACGAAGT AACAAGCCCG
GTGGCTTTTC TAGGTCTCGA AGGCCGTGGT GCCACGGTAT TATATCCCGA CCGCACCTTT
GCCACCGCCG ATCACAACAC ACCAACGCTC AACCAACACC TGCCCGTTGC TGATCCGATG
TCGGCCAATC AGTTGGCGGC TCTGGAGCGT AATGCCAAAA CATACGGTAT TTCGCACTGG
GGTCTTGGGC ACCAGAAAAA TGGCATTGTC CACGTAGTAG GTCCCGAAAA TGGCATCACC
CTGCCCGGCA TGACCATCGT TTGTGGCGAT TCGCACACCT CAACACACGG TGCCTTTGGC
GCTATTGCGT TCGGTATCGG TACGTCTGAA GTGGAAATGG TGCTGGCTAC GCAGTGCATC
ATGCAGCCCA AGCCCAAGAA AATGCGGATT ACCGTCAATG GTAAACCCGG TAAAGCGGTG
CTACCTAAAG ACGTCATTCT GTACATCATT TCGCAGACAT CGGCCAGTGG TGCTACGGGC
TACTTTGTCG AATACGCTGG TGAAGTGTTC GAGAACATGA CCATGGAAGG CCGTATGACG
GTTTGTAACA TGACCATCGA AATGGGTGCC CGTGGCGGTA TGATCGCTCC CGACCAAACC
ACACTCGACT ACCTCAAAGG CCGCGAACTA TCGCCCAAAG GCGAGCAGTG GGATAAACTC
GTTCCGTATT GGGAAAGCCT CAAAACCGAC GAAGGCGCTA CGTTCGACCT CGACCTTACC
TTCGATGCCG CCGATATTGA ACCCCAAATC ACCTACGGAA CAAACCCAGG TCTGGGCACC
GGTGTAACCC ACCAGATCCC AACCGCCGAC AGCGTAAAAG ATGGCTCCGC CAGCTACAAG
AAATCGCTGC AATACATGGG CTTCCAGGAA AACGAAAGCA TGATCGGCAA ACCGGTCGAT
TTTGTGTTCC TCGGCAGTTG CACGAATGGC CGGATTGAAG ATTTCCGCGC CTTTGCGTCG
ATTGTAAAAG GCCGCAAAAA AGCCGACAAC ATCACGGCCT GGTTAGTGCC GGGTTCGCAC
ATTGTTGAGA AACAGATTCA GGAAGAAGGC ATTCTGGATA TCCTGACCCA GGCCGGTTTC
GAACTCCGTC AGCCGGGTTG CTCGGCCTGT CTGGCCATGA ACGAAGACAA GGTTCCGGCG
GGTAAATACG CCGTATCGAC CTCCAACCGC AACTTCGAAG GTCGCCAAGG ACCGGGTGCC
CGCACGCTGC TGGCAAGCCC GCTGGTAGCA GCCGCTGCCG CCGTTACGGG TGTTGTTTCT
GACCCAAGAG GTTTAATGGA TAGTGTAAAC TGA
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| Protein sequence | MSTPKTLFDK VWDAHVIRQV KDGPDVLFID RHFIHEVTSP VAFLGLEGRG ATVLYPDRTF
ATADHNTPTL NQHLPVADPM SANQLAALER NAKTYGISHW GLGHQKNGIV HVVGPENGIT
LPGMTIVCGD SHTSTHGAFG AIAFGIGTSE VEMVLATQCI MQPKPKKMRI TVNGKPGKAV
LPKDVILYII SQTSASGATG YFVEYAGEVF ENMTMEGRMT VCNMTIEMGA RGGMIAPDQT
TLDYLKGREL SPKGEQWDKL VPYWESLKTD EGATFDLDLT FDAADIEPQI TYGTNPGLGT
GVTHQIPTAD SVKDGSASYK KSLQYMGFQE NESMIGKPVD FVFLGSCTNG RIEDFRAFAS
IVKGRKKADN ITAWLVPGSH IVEKQIQEEG ILDILTQAGF ELRQPGCSAC LAMNEDKVPA
GKYAVSTSNR NFEGRQGPGA RTLLASPLVA AAAAVTGVVS DPRGLMDSVN
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