Gene Slin_5886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5886 
Symbol 
ID8729663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7127741 
End bp7128073 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content48% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003390648 
Protein GI284040718 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.916767 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.00718137 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGGCGCA GTCTTGTGCG TATGGAATGG CTGACCGAGA AAGAAACGAA CTATACGGTA 
CTGGTGAGCA TCCTGACCGA TGGAGAAGAA AACGCATCAC GCGAGTTTAC CAGCCGTCAG
ATTCAGGCGA TGATAGAACG GCTTAAGCAA CACAACTGGT CATTTACCTA CATGGAGGCT
AATCAGGATG TTCAGCAGAT GGATTGGTCA CTTTCCATTT TGCAGTCGAT TACGTTTCAA
ACCAACGAGG CCGACATGAA AAACTTGTTG GTGCAGGAAC GCAAGGGACG CACAGCCTTT
TATGACAAAC GCAGCAAAGG CACTACGGTT TAG
 
Protein sequence
MGRSLVRMEW LTEKETNYTV LVSILTDGEE NASREFTSRQ IQAMIERLKQ HNWSFTYMEA 
NQDVQQMDWS LSILQSITFQ TNEADMKNLL VQERKGRTAF YDKRSKGTTV