Gene Slin_5874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5874 
Symbol 
ID8729650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7117522 
End bp7118259 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content53% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003390637 
Protein GI284040707 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.650646 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCAAC CCGTCTCCTG GAAACGTCGT CTTAAAAACT TTTTGTTTAT TGACCTCAAA 
ACGGTGGCGG GAGAGCCATC GCTCCTATCG GTTGATCCCC GTTTGCAGCG ACAGTGGGAA
GAGAAAAGCC GGTACTTTAA ACATGATGAT GAACTTTCGC CCGCAGGCTG GTACGACCGA
CGCGCTTCGT TCTTTGCTGA ATTTGGCAAG ATCATCTGCA TTGGTGTGGG TGGGCTGTTT
TTCGATGACG ACGACAAACC CCACCTGAAG GTCAAGTTGC TCAGCAATGA CGACGAAGTA
CCCTTGCTAA CTGAGTTTCT GGCCATCGTG GATCGATACC CACCCGGTGA ACTGACCCTT
TGCGCTCATA ATGGCAAGGA ATTTGACTTT CCCTATCTGT GTCGGCGGCT GATGGCCAAT
GGACTTCCAT TACCGCCAGC CCTCCAGATT TCCGGCAAGA AACCCTGGGA TATACCCCAC
CGCGATACGC TTGAGTATTG GCAATTTGGC GATAAACGGC ATTTTGTGCC CCTCGATCTG
CTGGCTGCCG TACTCAATGT ACCCACCCGC CCCCTAGAAT GGACCGGCGA CCGCACCAGC
GAGGTGTATT ACCGCGAACA CGACTGGCCC CGTATTGAGA AATACGCCCG CGACTCGATG
GTGATGCTGG TGCAGGTTTA CCTTAAAATG GTGGGTGCCC CGCTCGTGGC CGACGAGCAT
ATTGTCATGA GTGACTAA
 
Protein sequence
MPQPVSWKRR LKNFLFIDLK TVAGEPSLLS VDPRLQRQWE EKSRYFKHDD ELSPAGWYDR 
RASFFAEFGK IICIGVGGLF FDDDDKPHLK VKLLSNDDEV PLLTEFLAIV DRYPPGELTL
CAHNGKEFDF PYLCRRLMAN GLPLPPALQI SGKKPWDIPH RDTLEYWQFG DKRHFVPLDL
LAAVLNVPTR PLEWTGDRTS EVYYREHDWP RIEKYARDSM VMLVQVYLKM VGAPLVADEH
IVMSD