Gene Slin_5849 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5849 
Symbol 
ID8729624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7087366 
End bp7088214 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content55% 
IMG OID 
Productprotein of unknown function DUF477 
Protein accessionYP_003390613 
Protein GI284040683 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.522543 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGTAC TCACCTTTAT TTCATCGATT GCCCGATGGC TACGCCTGGG ACTGCTATTG 
GCTCTCCTTG CGGTTTCACC GTCTATCGTA CAGGCACAGG ACACTGCAAC CGACAACGGC
GCATCCGCGA ATGATGTTAT TCCTGACAAG CCGAATCCAC CCCGTTTGGT TAACGACTTT
GTCGGGATCT TAAACCCGAC CGAACGCAGC CAGCTGGAAC AAAAACTGCG TGCGTATAAC
GACTCCACAT CGACTCAGAT TACGATTGTT ATTGTCAAAA CTACAGAGCC TTATCCCATC
GGCGACTTTG CCTTTCAGGT CGGACGCAAA TGGGGAGTTG GGCAACAGGG AAAAAACAAT
GGGCTGGTAC TGGCCTGGGC CACCCAGACC CGTAAGATTT TCATTGCGCC TGGTTATGGG
CTGGAAGGAG CCATCCCCGA TGCGATTGCT AAGCGTATTA TCACCAATAC CATCGCTCCG
GCTTTTAAGC AGGAGCAGTA CTACCAGGGG CTGGATGAGG CAACGACCGA AATCATCAAA
CGAGCCAGGG GTGAATACCA GGCTGAACCA GACACCGACA CAGAAGGAGG CCCGGGGGCA
TTCCTGATCA TACTCATCGT TTTTATGGTT ATTATCTTCA TTATTTCCCG ACGCAATCGG
GGTGGGGGTA ATAGCGGTAA TCGCGGTGGT GGCTGGGGAG GTCCCATCTT TTTTCCAACA
TCTACATTCT CTGGCTGGGG CGGCTCCAGC GGTGGAGGAT GGAGTGGCGG AGGGGGCGGC
AGTGGTGGCG GCTTCGGGGG ATTTGGCGGT GGCAGCTTCG GTGGCGGTGG CGCTGGGGGC
GATTACTAG
 
Protein sequence
MNVLTFISSI ARWLRLGLLL ALLAVSPSIV QAQDTATDNG ASANDVIPDK PNPPRLVNDF 
VGILNPTERS QLEQKLRAYN DSTSTQITIV IVKTTEPYPI GDFAFQVGRK WGVGQQGKNN
GLVLAWATQT RKIFIAPGYG LEGAIPDAIA KRIITNTIAP AFKQEQYYQG LDEATTEIIK
RARGEYQAEP DTDTEGGPGA FLIILIVFMV IIFIISRRNR GGGNSGNRGG GWGGPIFFPT
STFSGWGGSS GGGWSGGGGG SGGGFGGFGG GSFGGGGAGG DY