Gene Slin_5839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5839 
Symbol 
ID8729614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7078894 
End bp7079925 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content52% 
IMG OID 
ProductUDP-glucose 4-epimerase 
Protein accessionYP_003390603 
Protein GI284040673 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACTCTTT CAGGCAATTC TCCCAAAATT CTGGTAACCG GAGGTGCAGG ATTCATAGGA 
TCCCACACGG TTGTTTCGTT GGTTAACGCC GGTTTTGAGC CGGTCATTAT TGATGACTTT
TCCAACTCTG AGCGCTCTGC TCTCGATGGG CTGCGGGCTA TCCTGGGCCG CGATGTAACC
TGCTATCCGG TAAATTGCAA TGATGCCGAG ATCATGGCCG ACATCTTCCG GAAAGAAGCA
CCCATTGGCG TTATTCACTT TGCCGCCAAC AAAGCGGTAG GTGAATCGGT CGCTAAACCG
CTGAAGTATT ACCGCAATAA CCTGGACCCG CTGATGCTGT TGCTGGAACT GATGCCTCAG
TTCTCTGTGC AGAACTTTGT GTTTTCGTCG TCCTGCACGG TATATGGTCA ACCCGCTCAA
TTGCCCGTAA CGGAAGAAAC CCCCCGTTTA CCGGCTCAGT CACCTTACGG GAATACCAAA
GCTATTGGCG AAGATATTAT CCGGGATGCA ATAGCGGCAC AGATACCGGT CAAAGCGCTG
GCCCTTCGCT ATTTCAATCC GATCGGTGCG CACCCATCAG CTGAAATTGG TGAGTTACCA
CTAGGTGTTC CGGCAAATCT GGTGCCGTTC ATTACACAAA CGGCCGCTGG CATACGCCCT
AGCCTGACTG TATACGGTGA TGATTATAAT ACGCCGGACG GCACCTGCAT TCGTGATTAT
ATCGATGTAG GTGATCTGGC CGATGCGCAC GTTCAGGCCC TGAAAAAGCT GATAGAAGCC
CCTGCGGGCG CGTCTTATGA CGTTATCAAT ATCGGCACAG GACGTGGCGA AACGGTTCTG
AACGTTATCC GGACGTTTGA AGAGGCTACC GGTGTGAAGG TTAACTATGT TATCGGGCCA
CGACGGGCGG GTGATGTGGA GCAGGTATAC GCCGATGTTA CGAAAGCCAA TCGTGTGCTG
GAGTGGTCGG CCCGCCGATC GCTCGCCGAG TCGTTACGGG ATGCATGGAA CTGGCAGAAA
AAATTAATAT AA
 
Protein sequence
MTLSGNSPKI LVTGGAGFIG SHTVVSLVNA GFEPVIIDDF SNSERSALDG LRAILGRDVT 
CYPVNCNDAE IMADIFRKEA PIGVIHFAAN KAVGESVAKP LKYYRNNLDP LMLLLELMPQ
FSVQNFVFSS SCTVYGQPAQ LPVTEETPRL PAQSPYGNTK AIGEDIIRDA IAAQIPVKAL
ALRYFNPIGA HPSAEIGELP LGVPANLVPF ITQTAAGIRP SLTVYGDDYN TPDGTCIRDY
IDVGDLADAH VQALKKLIEA PAGASYDVIN IGTGRGETVL NVIRTFEEAT GVKVNYVIGP
RRAGDVEQVY ADVTKANRVL EWSARRSLAE SLRDAWNWQK KLI