Gene Slin_5722 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5722 
Symbol 
ID8729497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6959399 
End bp6959749 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content52% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003390486 
Protein GI284040556 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.00300834 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCTTTCCA CGTCGGAACC GGCCCGGTGG GCGCTCGATT TTTTAAGCTT TCCGGTTGAT 
AGCGCACAAG ATTATGCCGC AGCGACTACA CGGTTTCTTT CGGCGCTTAC CGGCGGCTTT
TTGTTTGGCT GGGGCGTTTG TATCTGGTGC TTACAAAAAT GGGTGTACGA CGCAGCTCCC
GAAGGCGTAC GAAAAGCGGT ACTTACGAGC CTGATAGCCT GGTGCGTTCT GGATAGTGCA
GGCTCCCTGG CTTCAGGTAC TACGTCAAAT GTTTTCTTTA ACATCTTCTT CCTGTTGTTG
GCAGCCGGAC CACTTTGGAA ACCAATACAC GTGAATTCTC TCTCCCAATG A
 
Protein sequence
MLSTSEPARW ALDFLSFPVD SAQDYAAATT RFLSALTGGF LFGWGVCIWC LQKWVYDAAP 
EGVRKAVLTS LIAWCVLDSA GSLASGTTSN VFFNIFFLLL AAGPLWKPIH VNSLSQ