Gene Slin_5702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5702 
Symbol 
ID8729477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6937187 
End bp6937663 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content48% 
IMG OID 
Productfatty acid hydroxylase 
Protein accessionYP_003390466 
Protein GI284040536 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.733403 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGTAA ATGTTGCTTT GGTACTAGGG ACTTTCCTGT TTATGGAAGG CGTGGCATGG 
TTTACGCACA AGTACGTTAT GCACGGCTTT TTATGGAGCT GGCACCGCGA CCACCACAAC
CATCACAACG GTTTTTTCGA AGTAAACGAT TTGTTTGCCG TTGTCTTTAG CCTAACGGCC
ATTAGTATGT TTCTGGCCGG CGTAGCTATT CCTGAACTCA GCTTCCTGAC CTGGATTGGG
GCGGGTGTAA CCCTTTATGG CTTGTTTTAC TTCATCTTCC ACGACATCAT TGTTCATCGC
CGGGTGAAGA TGAAAATCGA TACGAGTGGC CGCTACATGC AACGCATCAT GCGGGCGCAT
TACATTCACC ATAAAGTACA CTCGAAAGAA GGTGCCGAAG CATTCGGCTT TCTGTATGCC
CCCAAAAAGT ACGACCGTCC TGTGAAAACG GTAAAAAAAG AGGTGCAGGC TGATTGA
 
Protein sequence
MLVNVALVLG TFLFMEGVAW FTHKYVMHGF LWSWHRDHHN HHNGFFEVND LFAVVFSLTA 
ISMFLAGVAI PELSFLTWIG AGVTLYGLFY FIFHDIIVHR RVKMKIDTSG RYMQRIMRAH
YIHHKVHSKE GAEAFGFLYA PKKYDRPVKT VKKEVQAD