Gene Slin_5685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5685 
Symbol 
ID8729460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6921007 
End bp6922155 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content50% 
IMG OID 
ProductGlycosyl transferase-like protein UDP- glucuronosyltransferase 
Protein accessionYP_003390449 
Protein GI284040519 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.706833 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTTT TATTTTTAGT GCAAGGCGAA GGTCGGGGTC ATTTAACACA GGCTCTGTCG 
CTGGCCCAGA TTTTACAGAT GGCTGGTCAT GAAGTGATTG GTGCCATTGT TGGCGTTACG
ACTGAGCGAA GCGTTCCTGG TTTTTTTACA GAGAAGTTCA CAGCGCCTAT CCTACCCATA
TTTAGCCCGG GCCTTGTTTA TAATGCAGGC ACCAATGCAC TGGACCCGTT TAAGACTACT
TTGCTGGCAC TTAAAACGAT GAAGCCATTC TGGCGTAGTT TACAACAAGT ACGCGATCAT
ATTGAGACTG AGCGCCCCGA CGTAGTTGTT AACTTCTATG AAATGTTGGG CGGAATGACC
TATGCCCTTT TGTGCCCTTC TGTACCGATG GTCTGTATTG CGCATCAGTA CATGGCATTT
CATCCTAATT TTCAGCGCCC CAAAGGCCAA TGGTTTTATG AACAGGCGTT TAAAGTAAAC
ACCCGGCTAA CTTGTTTTGG CGCTAAGGAA TTGCTGGCGC TTTCATTTGA TGAGCAGGCC
GACGAACCGC GTGAGCGGCT GCGGGTGGTT CCTCCGTTGC TTCGTCAGGA GGTTACAGAA
CTTACACCAA CGTTCTCTGC TGATTTCCTA CTGGCTTACG TAACTCAGCC TGGCCTGAAA
GTTGAGTTAC AGAAAGCGCA TCAGCAACAT CCGGCACAAA AGATGGATGC TTTTCACGCA
GATGCAACCG GGCCAAATCA GGTTATTGAC GATACGCTTA CCTATCATGC GATAGATGGC
AAACGATTTC TGGAGTTTAT GGCTCGCTGC AAAGCGATTG TCACCACGGC TGGCTTCGAA
TCCGTTTGTG AAGCAGCTTA TCTGGGAAAA CCAGCTTTGA TGATTCCGCA ACCGAATCAC
TTCGAGCAGG CTTGTAACGC CATTGATGGA CAGCGGGCGG GTGTTGGGAT TGCCTCGGAT
ACGTTCGATC TGAACAAGCT GTCGGAATTT CTGCCTGAGT ACGACACCCA GTTGAGTGAG
CGATTCCGGG CTTGGCACGC ACGGGGCTAC TTTATGTTTT TGGCCGCGCT AAACCGGGCA
GTTACGCCCA CCAGTAAACC GTCGGGTGGC TTTTTTTGGC CGCGCGTGCG GCATCTGCTA
CGCTCCTGA
 
Protein sequence
MRVLFLVQGE GRGHLTQALS LAQILQMAGH EVIGAIVGVT TERSVPGFFT EKFTAPILPI 
FSPGLVYNAG TNALDPFKTT LLALKTMKPF WRSLQQVRDH IETERPDVVV NFYEMLGGMT
YALLCPSVPM VCIAHQYMAF HPNFQRPKGQ WFYEQAFKVN TRLTCFGAKE LLALSFDEQA
DEPRERLRVV PPLLRQEVTE LTPTFSADFL LAYVTQPGLK VELQKAHQQH PAQKMDAFHA
DATGPNQVID DTLTYHAIDG KRFLEFMARC KAIVTTAGFE SVCEAAYLGK PALMIPQPNH
FEQACNAIDG QRAGVGIASD TFDLNKLSEF LPEYDTQLSE RFRAWHARGY FMFLAALNRA
VTPTSKPSGG FFWPRVRHLL RS