Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5684 |
Symbol | |
ID | 8729459 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 6920188 |
End bp | 6921018 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | epimerase |
Protein accession | YP_003390448 |
Protein GI | 284040518 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.947481 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGATA AAACAATTAC CATTCTTGGC TGTGGCTGGC TTGGATTACC ACTCGGTAGG GCTCTTGCGA CAGGAGGTTT CCAGGTGAAA GGAAGTACCA CAACACCAGA AAAGCTTACC AGACTTGAAC AGGCGTCTAT AGAAGGACAC CTGCTTCGAT TGAATCCTGA ACCGGAAGGT GAGTTGAGTA TACTTCTGCA AGCTGATGTA CTAGTAATCG ATATTCCGCC CAGAGCCGGT AAACAAGGCG ATGACTTCCA TCCTGCTCAG ATTAACCATC TGGCTAATGC CATTCGGCAA TCATCGATAA AGCATGTTAT ATATGTAAGC TCTACATCGG TCTATCCCGA ATTGAACCGG GTAGCTGTGG AGGAGGATGT TCAAGAGCCG GAGCAATCGG CTTCTCCGGC TTTAGTACAG GCAGAGCAAT ATGTGCAACG TTTAGCACCC GACCGATTGG TTACCATCGT TCGGTGCGGT GGATTGATGG GTTACGATCG TATACCCGGC AAATACGTTG CAGGACGCAC TGTTGATAGT GGAGCGGTAC CTGTTAACTA TCTGCACCGA AATGATGCTG TAGGCCTTTT AAAAGCGATT ATAACGCAAT CCCTGACTGG AGTTTATAAT GCCGTTTCTC CCGAACACCC AACGCGGGAG GCTATCTACC GCAAAAGCTG TGCAGATTTT GGTTACGCAC TGCCAACCTT CATTGATCCG GTAAGCCCGG TACCATACAA AGTGATTTCA CCAGAAAAAA TCATTTCCGA CACGGGCTAC CTGTTCCAGT ATCCAAACCC ATTGAGTTTT TTATATAGCT CAGGAGCGTA G
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Protein sequence | MPDKTITILG CGWLGLPLGR ALATGGFQVK GSTTTPEKLT RLEQASIEGH LLRLNPEPEG ELSILLQADV LVIDIPPRAG KQGDDFHPAQ INHLANAIRQ SSIKHVIYVS STSVYPELNR VAVEEDVQEP EQSASPALVQ AEQYVQRLAP DRLVTIVRCG GLMGYDRIPG KYVAGRTVDS GAVPVNYLHR NDAVGLLKAI ITQSLTGVYN AVSPEHPTRE AIYRKSCADF GYALPTFIDP VSPVPYKVIS PEKIISDTGY LFQYPNPLSF LYSSGA
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