Gene Slin_5624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5624 
Symbol 
ID8729398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6849647 
End bp6850783 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content47% 
IMG OID 
ProductAAA ATPase 
Protein accessionYP_003390388 
Protein GI284040458 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACGT TTGTTCAGCG TAGTCTTCAG TCAGTTATCG CATCCCAGTT AAATTCCAAT 
AAGGTCATTT TATTAGTTGG TGCCCGTCGG GTTGGCAAAA CGGTGCTGAT GAACCAGCTA
GCCGACTCGT ACGAGGGGTC TACCCTGTTG CTCAATGGCG ATGACATTAG TACGGCTGAA
CTACTCAACG ACCGGCGGGT ATCCAGCTAC AAACGCTGGC TTGGTGATAC AAAGCTTCTG
CTCATTGATG AAGCACAGGT CATACCTGAT GTCGGACGTT CGCTAAAGCT TCTCATCGAC
TCGTTTCCTA CCCTGACCAT ATTTGCCACG GGGTCATCAG CTTTCGACTT GGCGAATCGG
GCGGGCGAGC CGCTTGTTGG CCGTCAACTC ACCTATACAC TTTATCCACT GGCCCAACTC
GAACTATCGA CGACAGAAAC GTTTCTACAA ACGCGCGACC ATTTTACCGA CAGGCTCATT
TTCGGTAGTT ATCCGGATGT GGTACAAATG GACGATATCA ATGACCGCAT CGATTACCTG
AAAGGCATGG TTTCATCGTA TTTATTGAAA GATATTCTAC TATTTGAACA GGTAAGAAAC
GCCCACAAGA TGCTGCAACT CCTTCAACTG ATTGCTTATC AGACCGGCAG TGAAGTATCG
ACAGACGAAT TAAGTCGTCA GTTACAGATC GACCGGAATA CGGTCGTCCG ATACCTAGAC
CTGTTCACTA AGGTTTTCAT CCTATTCCGA TTAGGCGGCT ATAGCAGTAA TCTGCGCAAG
GAAGTTACGA AATCGTCGAA GTGGTATTTC TTTGATAATG GCATTCGCAA TGCGCTGATC
AACAATTTCA GTCTGCCCGC TCAGCGAAAT GACATGGGGG CCTTGTGGGA GAATTACTTG
GTTTCGGAAC GTCTTAAACG AAATGGGTAT CTACGAAGTC AAGCTATACC ATATTTCTGG
CGTACCTACG ATCAGCAGGA GCTTGATTGG GTTGAAGAAA CTAATGGCCA GCTAAGCGCC
TTTGAAATGA AATGGAACAC CAATCGTGTT CGCTTCCCTA AAGCGTTTCA AACGGCTTAT
CCAGATGCGT CTTTATCCGT TGTGAATCCG GATAACTACC TGGATTTTAT CACATAA
 
Protein sequence
MKTFVQRSLQ SVIASQLNSN KVILLVGARR VGKTVLMNQL ADSYEGSTLL LNGDDISTAE 
LLNDRRVSSY KRWLGDTKLL LIDEAQVIPD VGRSLKLLID SFPTLTIFAT GSSAFDLANR
AGEPLVGRQL TYTLYPLAQL ELSTTETFLQ TRDHFTDRLI FGSYPDVVQM DDINDRIDYL
KGMVSSYLLK DILLFEQVRN AHKMLQLLQL IAYQTGSEVS TDELSRQLQI DRNTVVRYLD
LFTKVFILFR LGGYSSNLRK EVTKSSKWYF FDNGIRNALI NNFSLPAQRN DMGALWENYL
VSERLKRNGY LRSQAIPYFW RTYDQQELDW VEETNGQLSA FEMKWNTNRV RFPKAFQTAY
PDASLSVVNP DNYLDFIT