| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5619 |
|---|
| Symbol | |
|---|
| ID | 8729393 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 6839773 |
|---|
| End bp | 6840699 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003390383 |
|---|
| Protein GI | 284040453 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.923848 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAAGCCC TCTGGCGCGA CCTGCGCGAC CATCTCCGCA CTGACTTTCG TCCTGATCTC
TACATCGCCA CCGCACTCTG GGCAGCACTA CTCCTCGCCG TCAACTATTA CTTCGACTTC
GAAGACCGCT ACATCGACGC GCATCAGGGA AAGCCGGTAT GGCCGGTGCT GTATTTTTGC
CTGTATGCGA CGGCCTATTA CATCAGCGTC TGGCTTTGGA CCTACTTTCA TAACCGACCC
GACATCTGGC GTAACCGCGA GTTCTGGCTC CGAAGTGGAA CCGCACTGAT TTGTTACTCG
ATTTATGCCG GTTTTTACGC ACATAGCAAC TGGAGCCGAC AACTGTTCGA TGGGCAGGTC
TATGTGTTTG CCTATTATTG TCTGCACAAC CTGCAGTCGG TGCTGACGAT TGTGTTGCCG
CTGTATCTGT TTTATACGTT TGCAGATCCT TACCGCTCAA ACTTTTATGG AATAGCGCCT
AAACGGAAGG GGCTTGTTCT ATACGCTTCT CTGTTGGCCC TGATGATTCC GCTCATTACG
CTGGCGTCGT TCCAACCCGA TTTCCTGCAA TCGTACCCAA CCTACCACGA TACCAACGCC
AACGAATTTT TCGGGGTACC CGAGTGGATA ACCGCACTCG TCTACGAGCT TTGCTACGGG
TGGGACTTCG TGCCGACAGA GCTGCTCTTC CGGGGCTTTC TGGTTATAGG TTTATCCCGC
GTTCTGGGTA ATGGAGCCGT TTTGCCGATG GTAGTCTGGT ATTGTTGCAT TCATTTCGGA
CGTCCGTTGG GCGAAGCGAT ATCGTCGCTA TTCGGTGGCT ATTTGCTGGG CGTTCTGGCG
TTGAGCACGC GCAGTATATG GGGTGGGCTG CTCATTCACA TCGGCATTGC ATGGGGTATG
GAAATTGCCG CATTTTTGCA ACGTTAG
|
|---|
| Protein sequence | MKALWRDLRD HLRTDFRPDL YIATALWAAL LLAVNYYFDF EDRYIDAHQG KPVWPVLYFC
LYATAYYISV WLWTYFHNRP DIWRNREFWL RSGTALICYS IYAGFYAHSN WSRQLFDGQV
YVFAYYCLHN LQSVLTIVLP LYLFYTFADP YRSNFYGIAP KRKGLVLYAS LLALMIPLIT
LASFQPDFLQ SYPTYHDTNA NEFFGVPEWI TALVYELCYG WDFVPTELLF RGFLVIGLSR
VLGNGAVLPM VVWYCCIHFG RPLGEAISSL FGGYLLGVLA LSTRSIWGGL LIHIGIAWGM
EIAAFLQR
|
|---|
| |