Gene Slin_5590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5590 
Symbol 
ID8729364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6805463 
End bp6806728 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content53% 
IMG OID 
ProductDNA-directed DNA polymerase 
Protein accessionYP_003390354 
Protein GI284040424 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGCA ACCGGCTTTT TACGCAAAGG CAACCCACCG TTCTCTTTGT GGATATGAAC 
AGTTTCTTCG CTTCCTGCGA ACAGCAGGAT AACTATTGGC TGCGGGGAAG GCCGGTTGGT
GTTTGTGTAT ATACCGGACG GAACGGCTGC GTGATTGCCC CATCGGTCGA AGCCAAGTTA
CGGGGCGTAA AGACCGGTAT GCGCCTGGAC CAGGCAATCG TACTCTGTCC GGAGTTGGTG
CCTATAGAAA CACACCCCGG TCGGTATCGC GAGTACCACG TGAAGATCAT TGATGTGTTG
CGGACCTTTT CCGATGATGT TGTGCCGAAA AGCATTGACG AAGCCGTGGT CGACCTGACA
AACTACCAGC TAGTGTACAA AGACATGTCA CAAACGGCCG TGGCAATTAA ACAGGCCATC
CGCCAGAAGG TGGGCGACTG GCTGCGCTGT TCCATTGGTA TTGCTCCGAA CGTTTTTCTG
GCCAAGCTAG CCTCCAACGT GCAGAAGCCG GATGGCCTGA CCATTATTAC CCCCGAAACG
ATTGACAGCG TGTTGCAAAC CATGACACTT ACCGATCTGC CCGGTATTGG TCACCGCATG
GCCGCCCGAC TGGAAGCGGG TGGGGTTCGT ACACCGCTTG AACTCCGCTA TGCTACCCCC
GATCACCTCC GGGCGGTTTG TAAGAGCATT ATTGGCTGGC ACTGGCACAT CCGGCTCAAC
TTTGGGGGCG AAGTGGATCT GGACACTAAT CCAGATAATA AGAGTATGTC GGCGATGCGG
ACCATTTCGC AGGAGCAGCG AAGCACGCCC GAACGCCTGG ATGAACTCCT GCAATCGCTC
TGCCTGACGC TCGAACGACG GATGGTACAG CGAGGAGTCT TTTGTCAGGA CATGTCGTTC
TCCTGCCGGT ACCACAATGG CAAAACCTAT AATTACGAAG CCCGATTCAA CGAGCCGAAG
CAGGATGGAT TGGAGCTATA CGGCATTATC CGTGAGCGTC TGGAAAAATT CCAGTTGGCT
CACCGCTGCG AACCGGTACT GAATGAACAC CTGCGTAGTA TGTGCGTAGC TGTATTTCGC
TTCATTCCGG CCGAAGTAGT TCCGCTAAGT CTGTTCGGAA ATGAGGACCG CAAGGGGAAA
TTTCGCCAGA CACTCTACGA CCTCAAGGCA AAATTTGGTA CTGATAAGCT GATCCGGGCT
ACCGAGCTGC GGGACAACCC GGTTTATAAA GACGTTATCG GCTTCGGGAA TATTAAAGAT
TTGTGA
 
Protein sequence
MNRNRLFTQR QPTVLFVDMN SFFASCEQQD NYWLRGRPVG VCVYTGRNGC VIAPSVEAKL 
RGVKTGMRLD QAIVLCPELV PIETHPGRYR EYHVKIIDVL RTFSDDVVPK SIDEAVVDLT
NYQLVYKDMS QTAVAIKQAI RQKVGDWLRC SIGIAPNVFL AKLASNVQKP DGLTIITPET
IDSVLQTMTL TDLPGIGHRM AARLEAGGVR TPLELRYATP DHLRAVCKSI IGWHWHIRLN
FGGEVDLDTN PDNKSMSAMR TISQEQRSTP ERLDELLQSL CLTLERRMVQ RGVFCQDMSF
SCRYHNGKTY NYEARFNEPK QDGLELYGII RERLEKFQLA HRCEPVLNEH LRSMCVAVFR
FIPAEVVPLS LFGNEDRKGK FRQTLYDLKA KFGTDKLIRA TELRDNPVYK DVIGFGNIKD
L