Gene Slin_5573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5573 
Symbol 
ID8729347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6787391 
End bp6788002 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content48% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003390338 
Protein GI284040408 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGTATC CTGATATTGC ACAAGAGTTG ATCGAACGGC AGAGAAACGA CCTTGATAGT 
AGACAACGCC TTGCTGCGGA AGGAAAGCTG GCTGGTGGAT ATAATCCGGA AATGGAAGAA
GTACACCTTG ACAATGCCCG GCGACTTCAG GAAATAATTG TTCAGATTGG CTGGCCAGCT
CAGGAACAAG TTGGCGAAGA AGCGAGTCAG GCAGCCTGGT TAATTGTCCA ACATGCCATC
AGCCTCCCTG CATTCATGAA AAGCTCGTTT GCGTTGATGA ACGAGCAAGC AAAAACGAGG
AAGATTGACC CGGTCAATCT GGCTTTTCTG GCCGACCGAA TCGCTATGTA TGAAAACCAA
CCCCAGGTTT ATGGTACTCA GTTTGTAGAC GACGGACAGG GCCGACTGGT GTGTTATCAG
CTTGATGATT CTGTCGAGAA GGTTAATCAA CGCCGTCAGA TGTTAGGACT AAACACAATC
GATGAGCAAT TAGTCGAATT GACAGCCCGG ATGAACGTTG AGCAGGCAAA ACTACCAACG
GCAAACGAAA GGCAACAAAT GCAGGAAGAC TATGATGCCT GGCGCCGAAA AGTTGGGTGG
ATTTCTGCAT AG
 
Protein sequence
MLYPDIAQEL IERQRNDLDS RQRLAAEGKL AGGYNPEMEE VHLDNARRLQ EIIVQIGWPA 
QEQVGEEASQ AAWLIVQHAI SLPAFMKSSF ALMNEQAKTR KIDPVNLAFL ADRIAMYENQ
PQVYGTQFVD DGQGRLVCYQ LDDSVEKVNQ RRQMLGLNTI DEQLVELTAR MNVEQAKLPT
ANERQQMQED YDAWRRKVGW ISA