Gene Slin_5557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5557 
Symbol 
ID8729331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6766745 
End bp6767563 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content55% 
IMG OID 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003390322 
Protein GI284040392 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAAGCT TTTTACATCA GGTTGCCTTC GTTACGGGCG CTGGGTCCGG TATTGGCCGG 
GCCACCGCAT TAGCTTTTGC CGGAGCAGGC GCTCGGGTTG TTGTCGCCGA AATCAATGAA
GAAAGTGGCC GGGAAACCGT CGGTCACATT CACCAGTCAG GAGGAGACGC GCTGTTTGTG
GCCTGTGACG TAGCTGAGCC AGCCCAAATC AATGCCGCCA TTCAGCAAAC CGTCGATACC
TATGGGCGGT TAGACATTGC CATTAATAAC GCGGGTATTG GCGGTCGGTA TGGTCGGTTT
ACGGAACAGA CGCCGGAAGA CTTCGACCGA ATTATGGCCG TTAATGTGGG TGGGGTTTTC
TATTGTATGC AAGCGCAAAT CCGGCAAATG CTTCTACAGC AGAAAGGGAC TAAAGCAGAA
GGAAAGACCG CCGAGTCGAA TCCCATGGAG AGCTTCCCGG TAGGGGGGCG CATTGTAAAC
GTGGCCAGTA TTGCCGGGGT ACGGGGGATG CCGATGGGCG CACCTTACAG CGCGTCCAAA
CATGCAGTGA TCGGCCTTAC AAAAACGGCT GCGCTGGAGT ATGTAAAACA GAATATCCGG
ATTAATGCCG TTTGCCCGGC TTATACGAAT TCGGCGATGG TCGATGGGTT GATCAGTGCA
GCACCCGCAA TGGAAGACCG CATGCGTCGT ATGATTCCCC TTGGCCGGTT TGGCCAGCCC
GAAGAAATTG CCCAGGCCAT TTTGTGGCTT TGCGCCGACG ACAACACGTT TTTTACGGGA
CAGACGCTCC AGCTGGATGG TGGTCTGACA GCCGGTTGA
 
Protein sequence
MISFLHQVAF VTGAGSGIGR ATALAFAGAG ARVVVAEINE ESGRETVGHI HQSGGDALFV 
ACDVAEPAQI NAAIQQTVDT YGRLDIAINN AGIGGRYGRF TEQTPEDFDR IMAVNVGGVF
YCMQAQIRQM LLQQKGTKAE GKTAESNPME SFPVGGRIVN VASIAGVRGM PMGAPYSASK
HAVIGLTKTA ALEYVKQNIR INAVCPAYTN SAMVDGLISA APAMEDRMRR MIPLGRFGQP
EEIAQAILWL CADDNTFFTG QTLQLDGGLT AG