Gene Slin_5492 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5492 
Symbol 
ID8729260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6684416 
End bp6685654 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content51% 
IMG OID 
Productproteinase inhibitor I4 serpin 
Protein accessionYP_003390257 
Protein GI284040327 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAA CTCTCTTTTC AACCGTTTCC GCAGCTGTAA CCGGTATTCT GCTCACAGCT 
GTCAGCTGCA ATACATCCAC AGTTACCCCA ACACCCGGCA CAACCGCTGA ACTGCGTGTT
TCGGCTCCTT TTGTCAACCA AACGACTCAA TTCGCTTTTG ATCTGGCCAA ACAGGTAAAC
GCACAGGATG GTCCGGCAAA AAACGTGTTT ATTTCGCCCC TTAGCCTTCA TATGGCGTTA
GGCATGATAC TGAATGGAGC TAATGGCCAA ACGGCTCAGG AGATCCAGAA AACGCTCAAA
CTGGACGCGC AAACGCTGGC CGAAGCTAAT ACAACGTATC AGAACCTGAT GGCCAATCTG
CCGGGAGTCG ACCCGAAGGT TACGATGAGG CTGGCAAACT CTGTTTGGTA CCGGAATACG
TTTACCGTCG AAACGGCTTT TCAGGACTTG CTGAAACAGA CCTTCAGCGC AGACATATCG
GCTCAGGATT TTAACAACCC GGCCACCGTT GGCACAATCA ACAGCTGGGC CAGTCAGAAA
ACCAATGGCA AAATCCCAAA GGTAATTGAT CAGATACAAC CCGACAATGT TCTGTTTCTG
ATGAACGCGC TGTATTTCAA AGGCGACTGG ACGACTCGCT TCGATGCCGC CAAAACCACC
GACTCACCCT TTACGCTGGT TTCCGACGCT CAGACAACCG TCCGGATGAT GCGGCTGAAT
ACCCAGTTGA ACCACGCATC GCGGCCAGGC TATTCGGCAT TCGAACTTCC GTACGGAGCG
GGTAATTATG TGATGACGGT GCTGCTGCCC ACCAGCAACA CAACAGCCGA TGCACTGATT
AACAACCTGA ACAGTGATGA GTGGGCACTG CTTCAAAAAG ACATGACCAA GAGTTTATTT
GATATTGGCC TGCCCAAATT CACGGTAAAC TACGAAGCGA AGCTAAACAA TGTGCTAAGC
ACACTGGGTA TGCCAACGGC CTTTACGGAT CGGGCAGACT TCACCAAAAT AAACGCAAAG
GGCGGCTTAC TGCTGAGCTT TGTGAAGCAG AATACGTTTG TGGCAGTTGA TGAAACAGGC
ACCGAAGCGG CTGCCGTAAC GACCGACGGT ATTTCAACCA CATCGGTCCA AATGCCAACT
CTGTGCGACC GGCCGTTTGT GTTCGTTATC CACGAGAAAA CATCGGGTAC GGTGCTGTTT
GTCGGCAAAA TCGCAGATCC GACTAAAACC AACGCCTGA
 
Protein sequence
MKTTLFSTVS AAVTGILLTA VSCNTSTVTP TPGTTAELRV SAPFVNQTTQ FAFDLAKQVN 
AQDGPAKNVF ISPLSLHMAL GMILNGANGQ TAQEIQKTLK LDAQTLAEAN TTYQNLMANL
PGVDPKVTMR LANSVWYRNT FTVETAFQDL LKQTFSADIS AQDFNNPATV GTINSWASQK
TNGKIPKVID QIQPDNVLFL MNALYFKGDW TTRFDAAKTT DSPFTLVSDA QTTVRMMRLN
TQLNHASRPG YSAFELPYGA GNYVMTVLLP TSNTTADALI NNLNSDEWAL LQKDMTKSLF
DIGLPKFTVN YEAKLNNVLS TLGMPTAFTD RADFTKINAK GGLLLSFVKQ NTFVAVDETG
TEAAAVTTDG ISTTSVQMPT LCDRPFVFVI HEKTSGTVLF VGKIADPTKT NA