| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5460 |
|---|
| Symbol | |
|---|
| ID | 8729227 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 6642627 |
|---|
| End bp | 6643643 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003390225 |
|---|
| Protein GI | 284040295 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.024139 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCATT ACTTTTTCAT TCGTAAACTA GTCGTACTGG TTCCGTTGCT CGTACTGATC
GGTTGCACCA AAGACTATCC ATCGCTCGAT GGCCCCAAAG TTGTGGTCGT TACGCCACCA
GCGGCTACCA CGCCGGGGAG TGGTTCGTCG ACCGCTGGCC CGGTTGCTCC GCCACCTCCC
TTCGATACGC TCAAGGTGTC GCCCCCTCGT TTTTCGCCCG ATGGCGGTAC ATTTTACCTG
AGCACTCCCG TACGCCTGAC CGCCGACACC CTGCCTGCCG GAGCCGTAAT CGAGTACTCG
CTGGATAACG GCAGCAGCTG GCTCACCGGC GATCAGTTCA CCGTTCTCTC CGGTGGCACC
ATACTTTCGC GGATTCGGGC CGGAGACAAA CGATCTATCA GCCGGGGGGC TTCGTTTTCG
CTCTATTATA AACGGATGCT GATCCTTGGC AACAGTATCA TGAGCCACGG CCCTGTGCCC
GACCTGGGCT GGTTCAATTT CAACGGCATG GCTGCGTCGG CACCCGAAAA GGATTTTGTT
CACCTGCTAA CGGGGCGGCT GCGGGCGCTT TACCCGCCTA TCACCGTCAA TCTGGAATCG
GGGGGGAGCT TCGAACGTGA TTTTGGAACG GCAGCGTATA GCCTTGATGA ATTTACACCG
ATACTGCAAC GGACTCAACC CGATTTGATC GTGCTGCGGA TCGGAGAAAA CATTGACCAG
AGTCTGGTCG CACAGCGTAA TTTTGAAAAA CAGTATCGAC AGCTCCTCGA CTTACTGGCC
AATTACGGTC AGCCGGTGCG TCTTGTCTGC ACAACCAGTG TCTGGGATAA ACCCCAATCC
GATGCCATAG TCCGGACGGT AACCCTTGAA AAAGGACACG CACTTGTAGA CTTGAGTCCA
CTTGTGGGAC AGCGGGCCTA CTTTGCCAGT CAGTATAAAG ACCCCGGTGT GGCCGCTCAC
CCCAACGATG CTGGTATGCA GCGAATCGCC GATTTGATCT GGGAGAAGAT TCAGTAA
|
|---|
| Protein sequence | MKHYFFIRKL VVLVPLLVLI GCTKDYPSLD GPKVVVVTPP AATTPGSGSS TAGPVAPPPP
FDTLKVSPPR FSPDGGTFYL STPVRLTADT LPAGAVIEYS LDNGSSWLTG DQFTVLSGGT
ILSRIRAGDK RSISRGASFS LYYKRMLILG NSIMSHGPVP DLGWFNFNGM AASAPEKDFV
HLLTGRLRAL YPPITVNLES GGSFERDFGT AAYSLDEFTP ILQRTQPDLI VLRIGENIDQ
SLVAQRNFEK QYRQLLDLLA NYGQPVRLVC TTSVWDKPQS DAIVRTVTLE KGHALVDLSP
LVGQRAYFAS QYKDPGVAAH PNDAGMQRIA DLIWEKIQ
|
|---|
| |