| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5439 |
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| Symbol | |
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| ID | 8729206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 6611012 |
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| End bp | 6613900 |
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| Gene Length | 2889 bp |
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| Protein Length | 962 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003390205 |
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| Protein GI | 284040275 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.648524 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.961509 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGCA ATCTATTACT TGTACTTTTC TCCCTGCTGT CTACAGCTGT ATTTGCCCAG
ACGGGTACAG TTCAGGGAAC CGTTAAAGAC GGAAAAACAA AAGAATCTCT TATAGGCTGT
ACCGTCCGCG TAGACGGCAC CCAGATCGGG GGAACTACCG ACATTGAAGG GCACTTTAAT
CTGGCCAATG TTCCGGCTGG TACGCACAAA ATTGTTATTT CATACGTCTC CTACAAAACT
CGGGAGATCC CTAATGTTCG GGTTGAATCG GGAAACACTA CCGCTATTGA TACCGAACTG
GATGAAGAAG GAACCTCCCT TCAGGAAGTG GTTGTCCGGG CCAATAAGGC GACCAACACC
GAAATTGCCG TTATCACCGA AATTAAGCAG CTGAAGCCCA TTGCCGTTGG TATTTCGGCG
CAGCAGATAC AGAAATCGCA GGATCGTGAT GCCGCAGCGG CCATTCGTCG GGTGCCGGGT
GTTAGTATCG TTGATAATCG CTTCGTTCTG ATTCGCGGGT TAGCGGCCCG TTATAATTCG
GTACTGATCA ACGATGTTAT TACGCCTTCT ACAGAAGTTG ATACTCGTTC ATTCTCCTTT
GATTTGGTGC CCAGCAACAT CATCGACCGG ATGATCGTCT ACAAATCAGG ATCGGCTGAG
CTGCCGGGTG ATTTTGCCGG TGGTATTGTC AAAATATATA CAAAACGTCG TCCTGACCAG
AACTTCATGG ATGCCGGGTT AACCCTGGGC TACCGGGGCA ACACCACCTT CCAGACGGTA
CAATCACAAA CCCGTTCTGG CTTAAACGCA TTGGGCCTTT GGGATGCCAG CCAGCAGATT
CCAACCAGTT TCCCGGCCCG ATCCGCTGAT TTTAACGCGC TGAACCCCTT ACAGCGGGCG
GCTTATGCCA GACTGCTGCC GAACACCTGG GCGTTGAAAG ACTTGACCTT ATCGCCTGAT
ATTCGATTTG CTCTGAACCT GGGCCGCCGA TTCGACGTGG GCGATGTACG GGTGAGCAAT
CTGACGAGTA TCAACTATTC GATGACGAAT CAGTTTTCGA ATATTGACCT TAAGCTGTAC
GATAATGGAA CCATTGCCAA CGCCATTACC CAGCAGTATA ACGATGCCAA CTACGCTCGC
CAGACCCGCC TGGGGCTTCT TCATAACTGG TCGGCGCGTT TCTCGCCCGG CTTTACGCTG
GAATGGAAAA CATTATTTAA CCAGTTGAGC ACCACCGAAA CTGTAGTTCG TACAGGTGCG
CAGGTGGCCG AAGGGTATGA CGTTCGTAGC TTTTCGGAGC GTTTTGAAAA CCGCAGTATC
CTGACCACGC AACTGGCGGG TGAGCACAGC ATCAGTCCGC TTACCAAAAT CAATTGGGTG
GGTAGCTTTG GCTATACCGG TCGCTGGGAG CCTGACTGGA AACGGGCTCG CTACCTGCGC
CCAACCGGTA CAACCGGTAG TGATGGTCAG CCTGCACCAT TCCTGATTGC TACGCCAAAC
GACCCGACGC CAACGGAAGT AGGCCGGTTC AACTCTAAAT TACACGAGTA TGTGATTTCG
GCCATCGCCA ATGGTGAGCA CACCTTCGGC AACCCAACTG ATCGGGAGCC GAACAAAATC
CGGTTTGGCG TGTATGCCGA ACAAAAGAAT CGCGACTATG CCGCTCATTT CTACGGTTAC
CAGGCCGTTG GTAGTGCGTC GGCTGCTAAA CAACGTGATA TAGCCACTGC ATTCGCGCCG
GAAAACGTAA CGGGTTCGCA AGGAAGCTTC TCCATGCTGG ACGGTACCCG CGACCGCGAT
GCTTACAAAG GTCAGAATAC CTACCTGGCT GGCTACGTTA GTGGCGACGT ATACTTTGGT
CCGAACGCTA ACCTGACGCT TGGCTTCCGG GGGGAATATA ATGACCAGGG TATCACATCC
AAACTAAACG GTGTGGATAC CCGGCTTGTA AACAACAAAA TTTTCAGTCC GCTGCCATCG
GTCAACTTTA CATACAAGCT GAGCGACCGT ACAAACCTTC GTTTTGCTTA CTCCTCGTCC
GTAAACCGGC CTGAGTTCCG GGAGTTGGCT CCGTTCAATT ACTACGACTT CAACCTGCTT
GCTGATATTC AGGGTAACAC GACCCTCACG ACGGCGAAGA TTCAGAACCT CGATGCCAAG
TGGGAGTTTT ATCCAAGCCC CAATGAGTTG ATTTCGGTAA CGGGTTTCTA CAAGCATTTT
ACAAACCCCA TCGAGTCGTA CCTGTTGTTT CAGGGCAATG GCCTTGCCTA TACGTTCACC
AATGCTCAGT CGGCGCAGAA TTACGGCGTA GAACTGGAGT TCCGTAAAGG TTTCCAGAAT
TCGGCCAGTG CGTTCCTGCA AAACCTGTCG GTAGTCGGTA ACGTTTCGCT CATTAAGAGT
CAGGTGAATG TGGGTGACAT CGTAACGGCT CCCGACCTGA GCGGCACCAT TCAGCAATAC
GATATTCGCG GCATTGCGGA TACCAAACGG GCGCTCGCCG GGCAGTCGCC TTACCTCATC
AACGCGGGTG TTTATTATGC CGCACCTAAT TCAGGCTGGC AGTGGAACGT GTTGTACAAC
GTTTTCGGTC AGCGGATTTT CACGGTGGGT AACAGCCAAA ACCCAACGGT GTACGAAATG
CCCCGGAACG TGATCGACCT CAACCTTACC AAGCAGTTTA ACAAAAAGCT TGAGCTGCGA
TTTGGTGTGC AGGACCTCCT GAACCAGTAC GTACGGTTCG CGCAGGATTT CAACCGGGAT
GGCAAAATCG GGAGCGACGT AACTTCCCAA ACGGCTGGTG CCGACCAGAT GCTTCGCAAG
TTCAAGCGGG GTAGCTACTA TACGGTCAGC GCTATTTACA CGTTTGGCCG CCGGACAGTC
ATCCCTTAA
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| Protein sequence | MNRNLLLVLF SLLSTAVFAQ TGTVQGTVKD GKTKESLIGC TVRVDGTQIG GTTDIEGHFN
LANVPAGTHK IVISYVSYKT REIPNVRVES GNTTAIDTEL DEEGTSLQEV VVRANKATNT
EIAVITEIKQ LKPIAVGISA QQIQKSQDRD AAAAIRRVPG VSIVDNRFVL IRGLAARYNS
VLINDVITPS TEVDTRSFSF DLVPSNIIDR MIVYKSGSAE LPGDFAGGIV KIYTKRRPDQ
NFMDAGLTLG YRGNTTFQTV QSQTRSGLNA LGLWDASQQI PTSFPARSAD FNALNPLQRA
AYARLLPNTW ALKDLTLSPD IRFALNLGRR FDVGDVRVSN LTSINYSMTN QFSNIDLKLY
DNGTIANAIT QQYNDANYAR QTRLGLLHNW SARFSPGFTL EWKTLFNQLS TTETVVRTGA
QVAEGYDVRS FSERFENRSI LTTQLAGEHS ISPLTKINWV GSFGYTGRWE PDWKRARYLR
PTGTTGSDGQ PAPFLIATPN DPTPTEVGRF NSKLHEYVIS AIANGEHTFG NPTDREPNKI
RFGVYAEQKN RDYAAHFYGY QAVGSASAAK QRDIATAFAP ENVTGSQGSF SMLDGTRDRD
AYKGQNTYLA GYVSGDVYFG PNANLTLGFR GEYNDQGITS KLNGVDTRLV NNKIFSPLPS
VNFTYKLSDR TNLRFAYSSS VNRPEFRELA PFNYYDFNLL ADIQGNTTLT TAKIQNLDAK
WEFYPSPNEL ISVTGFYKHF TNPIESYLLF QGNGLAYTFT NAQSAQNYGV ELEFRKGFQN
SASAFLQNLS VVGNVSLIKS QVNVGDIVTA PDLSGTIQQY DIRGIADTKR ALAGQSPYLI
NAGVYYAAPN SGWQWNVLYN VFGQRIFTVG NSQNPTVYEM PRNVIDLNLT KQFNKKLELR
FGVQDLLNQY VRFAQDFNRD GKIGSDVTSQ TAGADQMLRK FKRGSYYTVS AIYTFGRRTV
IP
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