Gene Slin_5437 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5437 
Symbol 
ID8729204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6608374 
End bp6608859 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content49% 
IMG OID 
Producttranscriptional regulator, BadM/Rrf2 family 
Protein accessionYP_003390203 
Protein GI284040273 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.843204 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTCTA AGAAAGCGAA GTATGCCATC AAAGCCCTCA AGGTTTTGAC TGAAGAGTAC 
GGCAAAGGCC CCGTACTAAT CTCCTACATT TCTGCAAAGG AGAATATCCC TAAAAAGTTT
TTAGAGGCTA TTCTTCTTGA ACTGCGAAAC CACGGAATCC TGCAGAGCCA AAAGGGAAAA
GGTGGTGGTT ATTTGCTTCG TGTAGATCCG GGCCGGGTAA ACCTGGCTCA GGTACTGCGG
GTTATTGATG GCCCGATCGC TCCAACCCCC TGCGTGTCGT TTAATTTCTA CGTCAAATGC
GACGACTGTA ACGATGAAGT GACCTGCGCG CTCCGACCCA TCATGGAACG TGTTCGGGAC
GCGAACTTAG GTGTATATGA GAACACAACG CTGTTGTCGT TTCAAAACCT GGGGTCAATA
GAAACAAAAG AAGTGGCTAT CGGCGCTGAA CTAGCCGAAA CCCCAGCCAA CCGGATGTCA
GCATAA
 
Protein sequence
MISKKAKYAI KALKVLTEEY GKGPVLISYI SAKENIPKKF LEAILLELRN HGILQSQKGK 
GGGYLLRVDP GRVNLAQVLR VIDGPIAPTP CVSFNFYVKC DDCNDEVTCA LRPIMERVRD
ANLGVYENTT LLSFQNLGSI ETKEVAIGAE LAETPANRMS A