Gene Slin_5354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5354 
Symbol 
ID8729119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6516944 
End bp6517900 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content51% 
IMG OID 
Productsignal recognition particle-docking protein FtsY 
Protein accessionYP_003390122 
Protein GI284040192 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCTAT TTGGTTTATT CTCGAAAGAA AAGAAAGAAA CGCTCGACAA AGGTCTGGAG 
AAAACAAAAG ACAGTTTTTT TTCTAAACTC GGTCGGGCGG TTGTTGGTAA ATCGACCGTT
GACGAAGACG TGCTGGATGA AGTCGAAAAC GTGCTCATCT CTTCCGACGT TGGCGTTGAA
ACTACAGTGA AAATTATTCG TCGGATTGAA GAACGGGTAG CCCGGGATAA ATACGTAGGC
ACCGACGAAC TCGACCGAAT CCTCCGCGAA GAAATTGCCG CTTTACTTTC CGATAATAAT
ACAGTCGATG TAGCAGACGA CTTTGCGCTT CCCGCTGGCA TAAAGCCTTA CGTGATTATG
GTGGTGGGCG TGAACGGGGT TGGTAAAACG ACAACCATTG GCAAACTGGC CGCCCAATTT
CATAAGCGGG GTAAAAAAGT AGTGCTCGGC GCGGGTGACA CCTTCCGGGC TGCCGCCGTT
GACCAGCTCA AGCTTTGGGG CGAGCGGGTG GGCGTTCCGG TCATCTCGCA CGGCATGAAT
ACCGATCCCT CGGCGGTGGC ATTCGATGCG GTGAAAAAGG CTACCGAAAT CGGCGCTGAT
GTGGTCATCA TCGACACCGC CGGCCGACTG CATACGAAGA TCAACCTCAT GAATGAGCTG
ACCAAAATAA AACGGGTCAT GCAAAAATTC ACGTCCGAAG CGCCCCACGA AGTGCTCCTG
GTTCTCGACG GCTCGACGGG GCAGAACGCC TTTATTCAGG CGACGGAATT CACGAAAGCC
ACCGAAGTAA CGGCGCTGGC TATTACCAAA CTCGATGGCA CAGCGAAGGG CGGTGTGGTG
ATCGGCATTT CGGATCAGTT CAAAATTCCG GTCAAATACA TCGGCGTGGG CGAGAAGATC
GACGATTTGC AGACGTTTAA CAAGATGGAG TTCGTGGATT CGTTTTTCAA GAAATGA
 
Protein sequence
MALFGLFSKE KKETLDKGLE KTKDSFFSKL GRAVVGKSTV DEDVLDEVEN VLISSDVGVE 
TTVKIIRRIE ERVARDKYVG TDELDRILRE EIAALLSDNN TVDVADDFAL PAGIKPYVIM
VVGVNGVGKT TTIGKLAAQF HKRGKKVVLG AGDTFRAAAV DQLKLWGERV GVPVISHGMN
TDPSAVAFDA VKKATEIGAD VVIIDTAGRL HTKINLMNEL TKIKRVMQKF TSEAPHEVLL
VLDGSTGQNA FIQATEFTKA TEVTALAITK LDGTAKGGVV IGISDQFKIP VKYIGVGEKI
DDLQTFNKME FVDSFFKK