| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5342 |
|---|
| Symbol | |
|---|
| ID | 8729107 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 6506691 |
|---|
| End bp | 6507971 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003390110 |
|---|
| Protein GI | 284040180 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTTTG ACGTCACTAC TCCTGCCCAC AAATGGCCTC TATGGCATAC GTTGCTCTTT
CGCTTCGGCT GTATTTACAT TCTGCTGTTC ACATCGCCCT GGGCCTGGAT CGGCGATTTG
CCCCTTCTGA ATTTAATTGG CAAGTATTAC GGTCTGGCCG AAGAGTGGCT GGTTAACCAG
GCTAATGCGT ACATTTTTCA CATTAAAGAC GTCCTGGTGC CGCTGAATGG GAGTGGCGAT
ACATCTTATG GCTATGCCCA GTTGTGTTTT TTTATCCTGA CCGCCGTTGT GGGTGCGCTG
ATATGGTCCA TCGTCGACAA ACGCAGGAAT TATGACGTCG CCTACTACTG GCTCATGGTG
CTGGTGCGGT ACTACGTGGC ACTAATTGCC CTGAGCTACG GCATCATCAA GCTGTTCGGG
TTGCAAATGG TCTTTCCGTC GATGAGTGCC CTGGCTACCC CGCTGGGCGA CTTGCTGCCC
ATGCGCTTAT CCTGGTATTT CATTGGCTAC TCAACACCCT ATCAGTTTTT CTCGGGTGCG
GTAGAGGTAC TGGCAGGGCT TCTGTTGCTC TTCCGACAAA CCAGTACGCT TGGGGCTTTT
GTGGCTGCCA GTGTTTTTCT TAACGTTATG GTATTAAATT TTTGCTACGA TATTCCGGTC
AAGCTGTTTT CTGCCCACCT GTTTATCCTG AGCAACGTTC TGCTGCTGAG CGATGCCAAA
CGCCTGCTCA ATTTCTTTAT TTATAACAAA GCTACCCAAC CCGCACCGCA AGTTGAACTC
CCTGAAAAGT GGATGCGAGG GACGCGGGTA ACGCTGAAAA TAGCGTTTGT TATCCTGTTT
ATCGGGATGC CGCTGTACGG GTCGTACCAG AGGGCGTTTG GGCCGACTGA TTCGAGTGCA
TCGAAGAGAC TGACAACGGG CTTCTTCTCG GTCGATCAGT TTCAGGGTAA CGTGGCCGAC
AGCCTGCGCT GGAAAGATGT TATCTTCGAA CCCAATACTT CAGGAAGTAT TCAGACCGCT
GATACGCTCT TCCGACAGCG TTACCGGCGG GGTTACTTCA ATTATTCATT CGATTCACTG
GCACATACGA TTGCCTTTAA GAAATCCCCG TCCGATTCGG CGGCACTGTT CACCATGCAG
TATACTATGC CGGATACCAA CCATGTGGTG CTACGCGGAA AAATCAGGAA CGACTCAGTC
ATGGTTGCCC TAACCCGTCA GAAACGTCAT TTTCAGCTTG CCGAACGCCA GTTCCACTGG
CTCTCCGAAG CCAATCGATG A
|
|---|
| Protein sequence | MTFDVTTPAH KWPLWHTLLF RFGCIYILLF TSPWAWIGDL PLLNLIGKYY GLAEEWLVNQ
ANAYIFHIKD VLVPLNGSGD TSYGYAQLCF FILTAVVGAL IWSIVDKRRN YDVAYYWLMV
LVRYYVALIA LSYGIIKLFG LQMVFPSMSA LATPLGDLLP MRLSWYFIGY STPYQFFSGA
VEVLAGLLLL FRQTSTLGAF VAASVFLNVM VLNFCYDIPV KLFSAHLFIL SNVLLLSDAK
RLLNFFIYNK ATQPAPQVEL PEKWMRGTRV TLKIAFVILF IGMPLYGSYQ RAFGPTDSSA
SKRLTTGFFS VDQFQGNVAD SLRWKDVIFE PNTSGSIQTA DTLFRQRYRR GYFNYSFDSL
AHTIAFKKSP SDSAALFTMQ YTMPDTNHVV LRGKIRNDSV MVALTRQKRH FQLAERQFHW
LSEANR
|
|---|
| |