Gene Slin_5283 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5283 
Symbol 
ID8729048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6444822 
End bp6445802 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content58% 
IMG OID 
ProductF420-dependent oxidoreductase, G6PDH family 
Protein accessionYP_003390051 
Protein GI284040121 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.176107 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAAAAA TAGGTTATCA CGCATCGCAC GAGCAATTTA AGCCTAGTAC CTTACTGGAG 
TACATTCAGT TGGCGCAACA GGCGGGTTTT ACGGCGGGCT CCTCGTCCGA CCATTTTCAT
CCGTGGAGCA ACCGGCAGGG CGAAAGTGGC TTTGCCTGGT CGTGGCTGGG GGCCGCTTTA
CAGGCCACTC CGCTATCGTT CGGGGTGGTC AACGCCCCCG GTCAGCGGTA CCATCCGGCC
ATTATTGCGC AGGCAGCCGC CACCCTCGCC GAGATGTTTC CGGAACGATT CTGGGTGGCT
ATGGGCACCG GGCAAGCCCT CAACGAAGCC ATCACCGGCG ACAAGTGGCC CGCCAAAGCC
GACCGGAACG CCCGCCTGAA AGAATGCGTC GACATTATTC GGGCCTTGTG GGATGGCGAA
ACGGTCACGC ATAAGGGGCT GGTGACGGTT GAGGAAGCAA CGATCTACAC CCGACCCGCC
ATAAAACCGC TGCTGTTCGG TGCCGCCGTA ACCAGCAAAA CCGCCGAATG GGTGGGGAGC
TGGGCCGATG GTTTACTAAC CATTTCGCAG CCGCTCGACC AGCTTCGGGA AGTCGTAGAG
GCTTTCCGGC GCGGTGGTGG CGCGGGAAAG CCGATGCATT TGAAGGTACA GCTTTCGTAC
GCCGATACGC TGGAGAACGC TAGAGCCGGG GCCTACGACC AATGGCGGGG CAACATTTTT
CCGAACGGCA TGCTCACCGA CCTCCGCCGA CCCGAGCAGT TCGACATGGC CGGTGAACTC
GTCAATCTGG CCGAAGTGGA TAAGATGGTC AACGTTTCGG CAGATACCAG CCAGCACATG
GCGTGGTTGC AAGGGTATAT CGACCTGGGA TTCGAACAGC TTTTTCTGCA CAACGTTAAC
CTTGAACACG AACGATTTAT CAACGATTTC GGCCACTACG TACTTCCCGA TCTGCTGCGG
CCAAGCTATG CCAGTTTATA A
 
Protein sequence
MLKIGYHASH EQFKPSTLLE YIQLAQQAGF TAGSSSDHFH PWSNRQGESG FAWSWLGAAL 
QATPLSFGVV NAPGQRYHPA IIAQAAATLA EMFPERFWVA MGTGQALNEA ITGDKWPAKA
DRNARLKECV DIIRALWDGE TVTHKGLVTV EEATIYTRPA IKPLLFGAAV TSKTAEWVGS
WADGLLTISQ PLDQLREVVE AFRRGGGAGK PMHLKVQLSY ADTLENARAG AYDQWRGNIF
PNGMLTDLRR PEQFDMAGEL VNLAEVDKMV NVSADTSQHM AWLQGYIDLG FEQLFLHNVN
LEHERFINDF GHYVLPDLLR PSYASL