Gene Slin_5277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5277 
Symbol 
ID8729042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6434467 
End bp6435105 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content35% 
IMG OID 
ProductPeptidase M23 
Protein accessionYP_003390046 
Protein GI284040116 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATACCAA TTCCAGTAAA TAAGTTGTTT AAAGGAATGG CTTATAGGAT TGACTCTTGG 
TTTGGACCAA GAAATACAGG ATTAGCCTAT GCAAGTAAAT TTCACAAAGG ACTTGATATT
AATTTTGGTG GTGGACGAGC CGATTATGGG GCGCCAGTAT TAGGGACGCA CGATGGTGTA
GCTTCAGTCA AAGATAATCT AAAAGGTAAT GAGGGTAGAA TGGTAACTTT AACTAGTCCA
GATGGGAAAT TTAGGACAAA ATATTTGCAT TTAAGTTCAA TAAATGTTGA AGATGGTCAA
AAAATTACAG AGATGACACA GGTTGGAGAA ATCGGAGGTA GTAGGATTGG AAAAGAATTT
GGAGGACAAG TACATTTACA CTATCAAATT GAAAGACTCA ATGAGGAAAG TGGGAAATTC
GAGCCTTACA ATCCAACTGA AGGTAAAGAC AGGAAAGAGT CGAATGTTGT TGATCCACAA
TCTTGGATTC AAAAAAAGGA AGATACTTTT CAAATGTCAC AACTTTCAAC AATGGACGCA
GATGCTACAA GAGTAGAACT TAATCAATTT TTCGATAGTT TGAAAAATAT GAAAACGGGA
ATTTATAAAG TTGTAAATGG TAAAATAATC TTAAACTAA
 
Protein sequence
MIPIPVNKLF KGMAYRIDSW FGPRNTGLAY ASKFHKGLDI NFGGGRADYG APVLGTHDGV 
ASVKDNLKGN EGRMVTLTSP DGKFRTKYLH LSSINVEDGQ KITEMTQVGE IGGSRIGKEF
GGQVHLHYQI ERLNEESGKF EPYNPTEGKD RKESNVVDPQ SWIQKKEDTF QMSQLSTMDA
DATRVELNQF FDSLKNMKTG IYKVVNGKII LN