| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5210 |
|---|
| Symbol | |
|---|
| ID | 8728976 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 6359500 |
|---|
| End bp | 6361587 |
|---|
| Gene Length | 2088 bp |
|---|
| Protein Length | 695 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003389981 |
|---|
| Protein GI | 284040051 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.8432 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAAGA AACAAAAAGG CCGGGCCGCT GTTGTCAGTG CCAGCCCAGC CCCGAAACCC
CCGACTCCCT CGAACCCAAA GCCAGATCAG CCTATTCTAC AACCCATTGA TGTCAATGAG
GATGTATCTG TCTTTGACTT GATCCGGTTT ACAAAACGGG TGAAAATTAC CCTCGGGGTG
TTTGTGGGCC TGTTTTTGGT GTTTGTCCTG TTTAAATGGC ATTACGTGTC TTTGCCCATC
TGGAACACGA TTCTGCCCGA CGGCTCCCCG ACCACCCGTG GTCTGGTTGC CGGAACGCCC
AAACAGATTC GGATGGACGA TTATGCGGTG GCGGCTCCCT GGATTCTCTC GAACGCCACC
AATGGGTTTG CGCAGGAAAA CGAAGCCATT GGCGGATTGA ACTCCTCGAT GATACTTTTA
CCAACGCATC ACGTGGTCAC GCTGTTCAGG CCGGGGCATT GGGGATTCAT GTTCCTCGAT
ACCGAACGGG GCTACAGCTG GATTTATGAC ATCAATCCGC TCATTCTGCT GGTGGATTCG
TTCCTGTTTT TCCTGTTGAT CACCCGCAAT CAGTACGGGT TATCGCTGGT AGGGTCGTTT
ACGTTGTTGC TATCGTCCGG AACGGTTCGC TGGTCGTTTA TTCCGTCAGC CATGATCGGA
TACTGCTGTG CGGCTTTCGT TACGGTCGTC TACTTGTTAT ACGAAAAGAA ACCGGCGCGG
GTGGCCCTTT TTGCGCTTTT ACTCGTTTGG CTGGTCTGTT CCTTCGCCCT GATTCTGTAT
CCGCCCTATC AACTGCCAAT GGCTTATTTG TTCGGATTTG CCCTGATCGG TTATCTGGCC
AACAACTATC GTTCTATTTT TCCGCTCAAA ACTGTTGTAG TCAAGCTGGT ATCGCTGGCC
GTTGCGGCCG GTCTGGCGGG CGTTGTTCTG TGGCTGTTTT TGGGCGATGT ACAGGAAACG
CTTAAAGCCG TAACCAGCAC CGTTTATCCG GGTCAGCGAA GTGAAAGCGG GGGGACTGGC
TTTGTTGGGA ACTGGTATTC CGAATATTAC AGCTGGTTTT TTGATGACCA GAAAGTGCCT
AAAAGCTGGC TGAACATCTG CGAACTGTCG CACTACCTTA ATTTTGCGCC AGTTATTATC
CCGCTGATGA TTCTGCTGTT TGTGCTGACC CGGAAAATCG ACTGGATGCT GGCCGCCATA
GCACTGTTTG TTATGCTGAT GTGGATCTGG GTCGAGGTGG GCTTCCCGGC AGGGTTGGCC
AAAGCCAGCC TGATGAGCAT GGTTCCCACG CGCCGGGCGC AGATTCCAAT GGGTGTTGGC
GGGATTATTC TGCTGATCGC CTACTTAGGA GCCATTCGGG ATAGTGCCAT TACCGATTTG
TACCGGCGGA TTCCAGTTTG GGGCAACGCC CTGGCTCTAA CCGCTATCGT TGGTTTCGTC
GTCTACACGG CTTATGTGAA TGTCAATGAT TCGGAAGGGT TGATCAAGCC GTATCAGACA
TTCGTGCCGG TCGTGTTTTT CGCGCTTATG AATGCGTTGT TGCTGTTCAC CATTCCGGTG
CGGTACCGGG TAACTATTTT TTGCGCTGGT TTGCTGGTTT TTCTGCTGCC CAACCTCAAG
GCGAATCCGC TGTCGAAAGG GCTGAGCCCC ATTACCGAAA ATGTATTTTA CAAAACCGTC
CGGCAGCTTG TTGAGCAGGA CCCGCAGGCC CGCTGGCTGG TAAACGGCAG TCAGTATCTA
ACCTATATGG TTACGGCAAC GGGTGCCAAA CAGATTACGG GCGTCAAATA CCTGCCCGAC
AGAAAGCACG TGCTTAAGGT GCTGGACCCC GAAATGAAGC GTGATTCGGC CTATAACCGA
TACGCCCACG TAACCAATCA GAGCTACATT AACGGTCGGG ATTCGGTAAT TCTGTTCAAT
CAGTTTGAAG ATGCCTATGT GATTGCGATG GACCCCTGCT CGCCCCGGAT GAAGCAGTTA
AACGTTAAAT ACCAGGTGTT CGACCACCAG CCGCAACCGG TAGAAGTGCG TTGCATGAAG
TCGGTCGCCA CGCTGGGCTC GCTGACCATT TATCAGGCTA ATCCTTAA
|
|---|
| Protein sequence | MSKKQKGRAA VVSASPAPKP PTPSNPKPDQ PILQPIDVNE DVSVFDLIRF TKRVKITLGV
FVGLFLVFVL FKWHYVSLPI WNTILPDGSP TTRGLVAGTP KQIRMDDYAV AAPWILSNAT
NGFAQENEAI GGLNSSMILL PTHHVVTLFR PGHWGFMFLD TERGYSWIYD INPLILLVDS
FLFFLLITRN QYGLSLVGSF TLLLSSGTVR WSFIPSAMIG YCCAAFVTVV YLLYEKKPAR
VALFALLLVW LVCSFALILY PPYQLPMAYL FGFALIGYLA NNYRSIFPLK TVVVKLVSLA
VAAGLAGVVL WLFLGDVQET LKAVTSTVYP GQRSESGGTG FVGNWYSEYY SWFFDDQKVP
KSWLNICELS HYLNFAPVII PLMILLFVLT RKIDWMLAAI ALFVMLMWIW VEVGFPAGLA
KASLMSMVPT RRAQIPMGVG GIILLIAYLG AIRDSAITDL YRRIPVWGNA LALTAIVGFV
VYTAYVNVND SEGLIKPYQT FVPVVFFALM NALLLFTIPV RYRVTIFCAG LLVFLLPNLK
ANPLSKGLSP ITENVFYKTV RQLVEQDPQA RWLVNGSQYL TYMVTATGAK QITGVKYLPD
RKHVLKVLDP EMKRDSAYNR YAHVTNQSYI NGRDSVILFN QFEDAYVIAM DPCSPRMKQL
NVKYQVFDHQ PQPVEVRCMK SVATLGSLTI YQANP
|
|---|
| |