Gene Slin_5179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5179 
Symbol 
ID8728945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6324002 
End bp6324790 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content51% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003389950 
Protein GI284040020 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.572189 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTTT TTCAGCAAGT TGTCTATACT ACGCCGGAAG AAACGATTCA GAACGTGAAA 
GAAGCCGTTC AGAATAACAA GCTGGTTTTT CTGTCGGGCT TTCGCGAAGA TTTGCCAGTA
CACGATTTTT ACAGCAAACT ATCTGAGACA ATTGGCCGTA TCCATGCCGC CGACGAAGAC
CTTGCTACCG GTAAAATGAC CGGAAATCGT TGGATCGACA TTACCTACGA CCCGCAGATT
CCAGACCGTT ACCGCTCCAG CAACACACGC CAGCCCATGC ATACGGACGA TTCGTACGTT
GAACTGGGTG GCGAAGAGGC TGTAAACTTT TTCTATTGCG CTTCCCGGGC CAAAATTGGC
GGAGCAACCA CGTTCTTCGA CCTGCCCGAC CTGGTTGAGT GCATGAAGCT GGATGGTGAA
GAGGCTTTGC TGGAAGAACT GATGGCTACC GACGTGGTTC ACGCCAAAGG CGGTGCCCGG
AAAGTTCGGA AAATTATTGA CAAAGATGGC GAAGGCTATC TGGCCAACTG GAACTACTTC
TGCCTGTCGC GGGAGGAGAA CACGCCGGAA GTGCTGGACC TCTGCGAGCG TTTCCACCAG
TTCCTTGAGT CGCGGATTAT GAATGCCGGT GTTATTTTGC CGGTTCAGCT GCAAAAGGGA
GAAGCTGTTT TCTTCCACGA TGATCGGGTG TTGCACGGCC GGAACGCATT CTTCGCCGAA
TATCCGGGTC AGCGCAGCCT GATCAAGGGG AAAATCATTA TTACACCAGC CGCCGACGCT
GTTTTTTGA
 
Protein sequence
MNFFQQVVYT TPEETIQNVK EAVQNNKLVF LSGFREDLPV HDFYSKLSET IGRIHAADED 
LATGKMTGNR WIDITYDPQI PDRYRSSNTR QPMHTDDSYV ELGGEEAVNF FYCASRAKIG
GATTFFDLPD LVECMKLDGE EALLEELMAT DVVHAKGGAR KVRKIIDKDG EGYLANWNYF
CLSREENTPE VLDLCERFHQ FLESRIMNAG VILPVQLQKG EAVFFHDDRV LHGRNAFFAE
YPGQRSLIKG KIIITPAADA VF