Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5179 |
Symbol | |
ID | 8728945 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 6324002 |
End bp | 6324790 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003389950 |
Protein GI | 284040020 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.572189 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTTTT TTCAGCAAGT TGTCTATACT ACGCCGGAAG AAACGATTCA GAACGTGAAA GAAGCCGTTC AGAATAACAA GCTGGTTTTT CTGTCGGGCT TTCGCGAAGA TTTGCCAGTA CACGATTTTT ACAGCAAACT ATCTGAGACA ATTGGCCGTA TCCATGCCGC CGACGAAGAC CTTGCTACCG GTAAAATGAC CGGAAATCGT TGGATCGACA TTACCTACGA CCCGCAGATT CCAGACCGTT ACCGCTCCAG CAACACACGC CAGCCCATGC ATACGGACGA TTCGTACGTT GAACTGGGTG GCGAAGAGGC TGTAAACTTT TTCTATTGCG CTTCCCGGGC CAAAATTGGC GGAGCAACCA CGTTCTTCGA CCTGCCCGAC CTGGTTGAGT GCATGAAGCT GGATGGTGAA GAGGCTTTGC TGGAAGAACT GATGGCTACC GACGTGGTTC ACGCCAAAGG CGGTGCCCGG AAAGTTCGGA AAATTATTGA CAAAGATGGC GAAGGCTATC TGGCCAACTG GAACTACTTC TGCCTGTCGC GGGAGGAGAA CACGCCGGAA GTGCTGGACC TCTGCGAGCG TTTCCACCAG TTCCTTGAGT CGCGGATTAT GAATGCCGGT GTTATTTTGC CGGTTCAGCT GCAAAAGGGA GAAGCTGTTT TCTTCCACGA TGATCGGGTG TTGCACGGCC GGAACGCATT CTTCGCCGAA TATCCGGGTC AGCGCAGCCT GATCAAGGGG AAAATCATTA TTACACCAGC CGCCGACGCT GTTTTTTGA
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Protein sequence | MNFFQQVVYT TPEETIQNVK EAVQNNKLVF LSGFREDLPV HDFYSKLSET IGRIHAADED LATGKMTGNR WIDITYDPQI PDRYRSSNTR QPMHTDDSYV ELGGEEAVNF FYCASRAKIG GATTFFDLPD LVECMKLDGE EALLEELMAT DVVHAKGGAR KVRKIIDKDG EGYLANWNYF CLSREENTPE VLDLCERFHQ FLESRIMNAG VILPVQLQKG EAVFFHDDRV LHGRNAFFAE YPGQRSLIKG KIIITPAADA VF
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